Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00881 ATGGAAACAGAAATAGAAGCCTTCCCCTTCCAAGAACTGAACCAGACAACCATGAACACAGAACCCATAAACCCAAACATCATCTCTTCATGGGTATACCTAGATGACATATATACCCCAGCTGCCATACCTCAAGAATTACAAGATCTCCAAATGGTAGAAGACCATCTATTCAATTTCACCACCCCCAATTTCGATATCGACCCGTTTTCTCTTTTACCCACACCTGATTCTCCTTTCCTACTAGACCTCTACGACTTCGATCCACAACAGAGACCCGAAAGCACTACCGATAGCTACCACCCGGTACCAGCTGTTACCGAAAACGAGTTCCAGACATTCCTCAATGACAACGAGCTTGGCCTAATTGCACCGGCGGAGAGTACTGATGAGAGTATCGGTCATCGCTTTTTCGATTCGACGACGACGACGACAATGATGTTGAATTCAAGTGAGGACGACATGTTACAAACGATGGTCATGGATACTAATGCGACCGATACCGCGACGGCGGGACATCAACGCGATGATGAAGAAAATGAGGATGAAACCGACGATGATCCGAAGCCGGGTACGTTGAATTGTAAGAATTTGGTATCGGAGAGGAATAGGAGGAAGAGACTTAGCCAACAATTGCTAGCTCTACGTGCTCTTGTACCAAATATCACTAAGATGGATAAAAGATCAGTTTTGGTAGACGCTCTATCTTATCTAAGGAACATTCATGAAGAAACTGCAAGAATTCAAAAGGAGCTCAAAGAACAACGCCACCTACCCAGGTTGACCAACTTAAGAGGGAATTGTCAAGATAACCCAGCTGGAACGTTTAGCATCCCGCGTACTTTAGCACACATCTCTGCTTCCAAGCCCAAAGCCCAGATTACTGAGATAGAGACTGAAAAAATAGAGGATCGTAGATTTGTGATAAAGATAACATGCAAGGGAGGGCTTGGTGTCAGTGGCGACATCCTTCGAGTGATTGAATCACTGTGTTTCGAGATTACGTTCGCCGCTTCCGAACAAATAAAGCCACAACAAATCCTAACAACAATTTTCATCCGGGTGAAGAAACCTGTGAAGATGACAGAGGAAAAATTAAAAGACTGTATTACAAGCACGGCTCTCAGAACAGGTCTGACTTTTCAACAGCCTTGA 1155 0.4442 METEIEAFPFQELNQTTMNTEPINPNIISSWVYLDDIYTPAAIPQELQDLQMVEDHLFNFTTPNFDIDPFSLLPTPDSPFLLDLYDFDPQQRPESTTDSYHPVPAVTENEFQTFLNDNELGLIAPAESTDESIGHRFFDSTTTTTMMLNSSEDDMLQTMVMDTNATDTATAGHQRDDEENEDETDDDPKPGTLNCKNLVSERNRRKRLSQQLLALRALVPNITKMDKRSVLVDALSYLRNIHEETARIQKELKEQRHLPRLTNLRGNCQDNPAGTFSIPRTLAHISASKPKAQITEIETEKIEDRRFVIKITCKGGLGVSGDILRVIESLCFEITFAASEQIKPQQILTTIFIRVKKPVKMTEEKLKDCITSTALRTGLTFQQP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00881 384 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 262 IPR036638 GO:0046983
Eupl10g00881 384 Gene3D - 200 268 IPR036638 GO:0046983
Eupl10g00881 384 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 102 337 - -
Eupl10g00881 384 MobiDBLite consensus disorder prediction 168 195 - -
Eupl10g00881 384 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Eupl10g00881 384 Pfam Helix-loop-helix DNA-binding domain 200 240 IPR011598 GO:0046983
Eupl10g00881 384 SMART finulus 198 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00881 Eupl-Chr10 28345562 28348596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00881 182 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 31.613 3.17e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl10g00881 HLH 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00881 - K26214 nnu:104592121 343.584