Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00863 ATGAATCGAGGTGTTTTACAGAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACTGGTGGAACAATAATAACATGCGCCCACCACCTCAACAACCATCTCCTTTCTTGCCTTCTCCTTCCTCTCTCTTCCCTCAGTACATACCTCCTTCTTCCTCACTTCCTTTAAACACTTGGCTTGATAACCAAGACCTTCCTGAGTCATGGAGCCAACTACTTCTGGGAGGGTTGGTGGGAGAAGAAGATAGATCGGGTCTAAGTCATTTTCAGGCAAAAAAGTCAGAGAATTGGGAGGATCAAGTGTTATATCCGTCGCCAAGTGTGCATGTTGTCGATGTTAAGCAAGAGGTATCTGAAACTGGTTACCTGTACCGTCATGGAAACGAAGAATTTCAAGCAGCAAGACCTAATTGGTCTCAAGTTATGCCAGTTTCATCTCCAAGTTCTTGTGTTACGAGTTTCAGCAGTAATAATATGTTGGATTTCTCGAATCGCAAGGCAGATGGGGTGCATCCACAACCAGATCATTCACCTGAGTGTAACAGCACAGCAACTGGAGGGGCATTTAAGAAGGCTAGGGTTCAACCTTCTTCAACCCAATCCACTTTCAAGCAGGTGAGGAAGGAGAAATTAGGTGACAGAATAACATCCCTTCACCAGCTGGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCTATTGGGTACATTAGATTCCTTCAGAGTCAAATTGAGGCCCTGAGCTCCCCGTACTTGGCTAATGGTTCAGGAAACATGAGGCATCAACAGTCTGTTCAAGGGGAAAGAAATAGTATATTTCCTGAAGACCCTGGTCAGCTGTTGAATGATACCTGCATGAAGGTAAGAGGAGCTACTGATCAGGATCCGGAAAACGAACCGAAGAAGGACTTGAGGAGTAGAGGATTGTGCCTGGTTCCTGTTTCATGCACTCTGCAAGTTGGGAGTGACAATGGGGCTGATTATTGGGCTCCGACGCTTGGCAACGGGGGTTTTCGATAG 1035 0.4618 MNRGVLQSSPVQQMMAGNPNWWNNNNMRPPPQQPSPFLPSPSSLFPQYIPPSSSLPLNTWLDNQDLPESWSQLLLGGLVGEEDRSGLSHFQAKKSENWEDQVLYPSPSVHVVDVKQEVSETGYLYRHGNEEFQAARPNWSQVMPVSSPSSCVTSFSSNNMLDFSNRKADGVHPQPDHSPECNSTATGGAFKKARVQPSSTQSTFKQVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLANGSGNMRHQQSVQGERNSIFPEDPGQLLNDTCMKVRGATDQDPENEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPTLGNGGFR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00863 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 325 - -
Eupl10g00863 344 FunFam Transcription factor bHLH123 family 206 269 - -
Eupl10g00863 344 CDD bHLH_AtbHLH_like 205 253 IPR045239 -
Eupl10g00863 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 258 IPR036638 GO:0046983
Eupl10g00863 344 MobiDBLite consensus disorder prediction 1 28 - -
Eupl10g00863 344 Gene3D - 194 267 IPR036638 GO:0046983
Eupl10g00863 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Eupl10g00863 344 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00863 Eupl-Chr10 28151028 28154349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00863 1 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 47.564 1.03e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00863 - - nnu:104592137 500.745