Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00860 ATGAGCTCATTTAAAGCTTCCAACTACTTTAAACCTCCTTGTAGTTATCGCCTACGGCGAGAGAAACCTGCAAATTCATTGTACTTCGGAATTTTAGGATTTCTGCTCGTCTCTCACCGAAGAATCCCTAGGTTTTCGTTCTCTCAAGCTCGGTCATTTTCAATATCATCATCTCGTACATATATGGAGGTGGTCAAAGCAGCTGCGAGGCAGGGATCTGCGGCAGGTGAAAGTATTGCTCTTAGAGTCGAGCAGAAGAGTTACAGTTACGTTCAACTCATCTCTTCTGCTTGGAAGATATCCAAACTCTTATGCAATGGAGGCATTAAAAATACATCTGAAGGCATCAGAGGAACAGGATATCTTGGTGGAGCTCGGATAGGAATTGTGGCTAAACCTTCAGCTGAATTTGTTGCTGGGATGCTAGGGACTTGGTTTAGTGGAGGAGTTGCAGTTCCACTTGCACTTAGCTACCCAGAAGCTGAACTTTTCCATGTGATGAATGATTCGGATGTCTCCATGCTTTTGAGCACTGAAGATCATCAACAGCTTATGGAGAATGTTGCTGCTAAATGTGCTTCTCAATTTTCTCTTATTTCCTCTGTTCCCAGTATTCCACCAAAGATAAGTACTCATGGACATTCACAAATTGGAGAAGTGGCTATGGAGAAAAACCTGTTGGAGGAAATTGAAAACTCAACAGTGCCAGAAGGAGATGACCCTGCATTGATTGTGTATACTAGTGGTACTACTGGTAAACCTAAGGGTGTTGTTCACACACACAAAAGCATCAATGCTCAGGTCCAAATGTTGACAGAGGCCTGGGAATATTCATCTTCGGATCAATTTCTGCATTGTCTACCCTTACACCATGTTCATGGGCTTTTCAATGCTTTACTTGCCCCTCTTTATGCTGGTGCAGTGGTTGAGTTCATGCCAAAATTTAGTGTGAGGGGAATCTGGCAGAGATGGCGTGAATCATACCCAAAAGAAGGAATTAAGGTCGATGACTCTATTACTGTGTTCACAGGAGTTCCAACAATGTATACTAGATTGTTACAAGGTTATGAAGCAATGGATCAAGAATTACAAGCTACTTCAGCCTCAGCTGCAAGCCAGTTGCGCCTTATGATGTGTGGCTCCTCTGCACTTCCCTATCCTATTATGAAGCAATGGGAAAGCATAACAGGCCACCGCCTCTTGGAACGCTATGGCATGACTGAGTTTGTCATGGCATTGTCTAATCCTTTAAAAGGTATACGAAAGGGGTGCACAGTCGGCAAACCACTTCCGGGTGTGCAGGTCAAAATTCTTGCAGAAGATGAGAGTGAAAGTGATACTATGGGGATGGGGGAGCTTTGCATTAGAAGCCCTTCAATGTTCAATGAATACTGGAAACGACCTGAGGTTACAAAGGAATCATTTATTGATGGTGGATTCTTCAAGACTGGTGATATGGTTAAAGTGGATGAGGATGGGTACTACATTATTCTGGGACGTACAAGTGCTGATATCATGAAGGTTGGTGGATATAAGCTATCTGCATTAGATATTGAAGCAGTGCTTCTAGAGCATCCTGCTGTGTCAGAGTGCTGTGTGCTGGGTTTACCAGACAAAGACTATGGAGAAGCTGTATGCGCAATAATTGTACCGGCAGCAGATGCAAAGAGAAAAGGGGAGGAAGAGTTTAAGCCCGCTATCAGCTTGGAAGAACTTCGGACCTGGGCTAAGGAGAAACTTGCTCCATATAAGATACCAACGAGATTGTTCTTGTGGGATTCACTTCCCCGTAATGCCATGGGAAAGGTGAATAAAAAGGAGATGAAAAAAATGTTAGACTGCTGA 1845 0.4347 MSSFKASNYFKPPCSYRLRREKPANSLYFGILGFLLVSHRRIPRFSFSQARSFSISSSRTYMEVVKAAARQGSAAGESIALRVEQKSYSYVQLISSAWKISKLLCNGGIKNTSEGIRGTGYLGGARIGIVAKPSAEFVAGMLGTWFSGGVAVPLALSYPEAELFHVMNDSDVSMLLSTEDHQQLMENVAAKCASQFSLISSVPSIPPKISTHGHSQIGEVAMEKNLLEEIENSTVPEGDDPALIVYTSGTTGKPKGVVHTHKSINAQVQMLTEAWEYSSSDQFLHCLPLHHVHGLFNALLAPLYAGAVVEFMPKFSVRGIWQRWRESYPKEGIKVDDSITVFTGVPTMYTRLLQGYEAMDQELQATSASAASQLRLMMCGSSALPYPIMKQWESITGHRLLERYGMTEFVMALSNPLKGIRKGCTVGKPLPGVQVKILAEDESESDTMGMGELCIRSPSMFNEYWKRPEVTKESFIDGGFFKTGDMVKVDEDGYYIILGRTSADIMKVGGYKLSALDIEAVLLEHPAVSECCVLGLPDKDYGEAVCAIIVPAADAKRKGEEEFKPAISLEELRTWAKEKLAPYKIPTRLFLWDSLPRNAMGKVNKKEMKKMLDC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00860 614 ProSitePatterns Putative AMP-binding domain signature. 244 255 IPR020845 -
Eupl10g00860 614 Gene3D - 503 613 IPR045851 -
Eupl10g00860 614 Gene3D - 68 500 IPR042099 -
Eupl10g00860 614 Pfam AMP-binding enzyme C-terminal domain 517 602 IPR025110 -
Eupl10g00860 614 CDD MCS 77 610 - -
Eupl10g00860 614 FunFam Acyl-CoA synthetase family member 3 70 500 - -
Eupl10g00860 614 SUPERFAMILY Acetyl-CoA synthetase-like 63 611 - -
Eupl10g00860 614 Pfam AMP-binding enzyme 112 507 IPR000873 -
Eupl10g00860 614 PANTHER ACYL-COA SYNTHETASE 79 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00860 Eupl-Chr10 28096915 28115450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00860 239 612 Monolignol Biosynthesis Gene Families AT4G19010 27.835 1.30e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00860 K18660 - nnu:104595150 933.324