Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00857 ATGGATCCTCCCTCTCGGAGCTGGAGCATCTACAGCCGCACAGAGATCACTCAACTATACGAAATCCTCGAACGAATCGGTTCTGGTGCTTACTCCGACGTATACAGAGCTCGTCGCCTCTCCGACGGTCTCATCGTCGCTCTCAAAGAGATTCACGACTACCAGAGCGCCTTCAGGGAGATTGAAGCCCTTCAACTGCTCCAAAATTCCCCAAACATTGTTGATCTCTACGAGTACTTTTGGCGGGAAGAAGAAGACGCCGTTCTTGTTCTTGAATTCCTAAGGACCGATCTCGCTTCTGTGATCAGAGAAGCTAAGAGGAATCGGGAGAATGGGATCACTGTTGGCGAGATCAAGCGGTGGATGATTCAGATATTGCAGGGTGTCGATGCCTGCCACAGGAGTTCGATTGTTCATCGAGATCTCAAGCCCGCCAATCTGTTGATTTCTGACGATGGTGTTCTCAAATTGGCGGATTTTGGACAGTCGAGGATACTTCCGGAGCCTAAATTTGTTACTGAGGAAGATGACCGACATGAGCAAAATACTCCAAATCAGACATGGCCACCCCAACAGCCCGAAGTTATTTCTGAAATAGACAATACATACACGGAAGGCTTGGGAAACCAAGAGCAAAGAATTATCAGTAAAGAAGAATATTTGCAAGAATTAGATGTCTTCAAGGCTAAGAACTCTTTGGATGAAACAGATACGGATCCTAATTTTCACGATGGAGACACTTCTTGTCTTGCTACGTGCACCACAAGTGACATGGAAGATGATCCTTTGAAAAACTATGAGGCAGAGGCATGCGGAGAAGATGGATCTGGTGCTCTCACATCCTGTGTCGGAACTCGTTGGTTCAAGGCCCCTGAGCTACTTTATGGATCCATGGATTATGGGCCAGAGATCGACCTATGGTCACTGGGCTGCATTTTTGTGGAGCTTCTCAATTTAGAACCTCTTTTTCCAGGAACTTCAGATATTGATCAGCTTAGCAGGATCGTCAATGTCTTGGGCAACTTAACTGAGGAAACCTGGCCAGGTTGTTCAAAACTTCCTGACTATGGAAAGATCTCCTTTGGTAAGATAGAAAATCCACTAGGTTTAGAAGGGTGCCTGCCGAACTGCTCCAACAATGAAATCCGTCTTGTTCAGAGACTTGTTTGTTATGACCCAGCAAGTAGAGCTACTGCAGTAGAACTGCTACATGACAGGTACTTTAACGAAGAGCCTCTACCAGTTCCGGTAAATGAGCTCAGGGTTCCGTCTACAAACAGTGGGCAAGATGAGAGATCCTCAGGAGATTGGTGTGACTACAAGGACATGGGTTCAGATTCTGATTTTGAAGAATTTGGTGGTGTGGATGTTTCGACCACTGGTACTGGCTTCTCTATTCGATTCCCTTAA 1410 0.4624 MDPPSRSWSIYSRTEITQLYEILERIGSGAYSDVYRARRLSDGLIVALKEIHDYQSAFREIEALQLLQNSPNIVDLYEYFWREEEDAVLVLEFLRTDLASVIREAKRNRENGITVGEIKRWMIQILQGVDACHRSSIVHRDLKPANLLISDDGVLKLADFGQSRILPEPKFVTEEDDRHEQNTPNQTWPPQQPEVISEIDNTYTEGLGNQEQRIISKEEYLQELDVFKAKNSLDETDTDPNFHDGDTSCLATCTTSDMEDDPLKNYEAEACGEDGSGALTSCVGTRWFKAPELLYGSMDYGPEIDLWSLGCIFVELLNLEPLFPGTSDIDQLSRIVNVLGNLTEETWPGCSKLPDYGKISFGKIENPLGLEGCLPNCSNNEIRLVQRLVCYDPASRATAVELLHDRYFNEEPLPVPVNELRVPSTNSGQDERSSGDWCDYKDMGSDSDFEEFGGVDVSTTGTGFSIRFP* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00857 469 Pfam Protein kinase domain 20 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00857 469 Pfam Protein kinase domain 277 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00857 469 SUPERFAMILY Protein kinase-like (PK-like) 6 424 IPR011009 -
Eupl10g00857 469 ProSiteProfiles Protein kinase domain profile. 20 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00857 469 Gene3D Transferase(Phosphotransferase) domain 1 12 206 - -
Eupl10g00857 469 Gene3D Transferase(Phosphotransferase) domain 1 251 422 - -
Eupl10g00857 469 MobiDBLite consensus disorder prediction 418 437 - -
Eupl10g00857 469 SMART serkin_6 20 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00857 469 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Eupl10g00857 469 FunFam Cyclin-dependent kinase F-1 11 105 - -
Eupl10g00857 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Eupl10g00857 469 PANTHER CELL DIVISION PROTEIN KINASE 20 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00857 Eupl-Chr10 28022363 28026458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00857 4 469 Core Cell Cycle Gene Families AT4G28980 62.055 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Eupl10g00857 Pkinase 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00857 - - nnu:104592149 716.842