Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00845 ATGGCCGTTGACATGTCGAACCCTCAAACTTCTCGTATGAAAGACTTCTTTGCTTCTCCAGCTCTGTCTCTCACTCTTGCCGGTGTTTTTCGCAATGCGGGCACAGTGGAAGCGTCAAGTATGGAGGTGGAGGAAGGATATGAAGAGAGCGGAGGCCGTGGTCGAGAAGTAACAGTGGAGGTTAGCAGTGAGAACACAGAAACTGGAAAATCAGAGGACGATATCGACGGAGTACAAGATGAGGAGGATGGTGAGGAAGATAACAACAAGAAGAAGAAAAGAAAGAAGTTTCATAGACACACAACTGAGCAAATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCTCCCCATCCAGATGAGAAGCAAAGGCAGCAACTGAGCAAGCAATTAGGCCTTGCTCCTAAGCAAATCAAGTTCTGGTTTCAAAATCGTCGAACCCAAATCAAGGCCATACAGGAGCGACATGAGAATTCTCTATTCAAATCGGAAATGGAGAAACTCCAAGAGGAAAATCGATGCTTGAGGGAGACCATTAAGAAGACATGTTGCCCGAATTGTGGCTGTGCCACCTCTGGTGCAGATGCTAGGACAACAACAGAGGAACAACAGCTACGAATTGAAAATGCAAGACTCAAAGCTGAGATGGAAAAATTACGAGCAATTGCCGGAAAATACCCGAGTGGAGCAGCATCGCCTAGCTCCTCGTGCTCTACGGGAAATGACCGAGAGAATGGAAGCTCTGTAGATTATTACACTGGAACTTTTGGGCTAGAGAAATCAAGAATTTTGGAGATAGTCAACCAAGCAATGGAAGAGCTCACAAAGATGGCCACTGCAGGCGACCCGTTATGGATTCGAAGCGTTGAAACAGGCCGGGAGATACTCAATTACGATGAGTACATACGCGAGTTCTCACCTGAGAAGTCGTGCAATGGACAAGTCAGGCGATCCATCGAGGCCTCAAGAGAGACGGGCATTGTCTTCGTCGACCTCCCCAGGCTAGTTCAAGCTTTCATGGATGTGAATCACTGGAAGGAAATGTTTCCTTGCTTGATCTCCAAGGCGGCTACCATTGATGTAATCTCAACTGGTGAAGGCGCCAACAGAAACGGTGCCGTACAACTAATGTTTGCAGAGCTACAAATGCTCACACCAATGGTGCCAACAAGAGAGGTGCATTTCATCCGATATTGCAAGAAACAGAGTCCCGATCGTTGGGCAGTCGTCGATGTCTCAATTGACAAAGTTGAAGACAACACTGGTTCCTCCCCTGTAAAATGTCGAAAACGAGCATCTGGCTGCATCATAGAGGACAAGTCCAATGGCCATTGCAAGGTGATTTGGGTTGAGCACTTAGAATGCCAGAAAAGTGTGGTTCACACCATGTATCGTTCTATTGTTAGCAATGGACTCGCATTTGGAGCAAAGCACTGGATGGCAACATTGCAGCTTCAGTGTAAGCGGCTCGTTTTCTTCATGGCAACCAATGTTCCGACAAAGGATTCAAGTGGGGTTGCCACATTGTTTGGAAGACAAAGCACTCTGAAGTTGGCGCAGCGGATGTCGCAGATCTTTTGTCGCGCAGTTGGTGCATCTAGCTATAACACATGGTCCAAGCTTTCGACTAAATGGGGAGACGACATAAGGGTGTCTTCTAGGAAGAACTTGAATGACCCAGGAGAACCTCTAGGGATGATTCTCTGTGCAGTTTCATCTGTTTGGTTGCCTGTCTCTCCTCATATCCTATTTGATTTCTTAAGAGATGAAGCTCGAAGGAATGAGTGGGATATCATGTCGACCAGAGGTTCAGTACAAAGTATTGCAAACTTAGCTAAAGGACAAGATCGAGGCAACGCGGTAACAATCCAAGCGACGATATCCAAAGATAGTAGCAAGTGGGTACTCCAGGATAGTTGCACGAATGCTTACGAATCCATGGTAGTCTATGCTCCTGTGGACATCGCCAGTATGCAATCAGTTATGACAGGATGCGACTCGAGCAACGTTGCCATATTGCCTTCAGGTTTCTCAATTCTTCCAGACGGGTTCGAGACAAGGCCTCTTGTGATCACCTCTAGGCCAGAGGAGAAAACCATGGATGGGGGATCCTTACTTACTATGGCATTTCAAATCCTGGTTAATACCTCTGCCACGGCTAAACTAACCATGGAATCTGTCGAAAATGTTAACATTCTTATGTCATGTACACTGAAGAATATTAAGACAAGCTTACAATGTGATGAAGATGGATTATAA 2256 0.4614 MAVDMSNPQTSRMKDFFASPALSLTLAGVFRNAGTVEASSMEVEEGYEESGGRGREVTVEVSSENTETGKSEDDIDGVQDEEDGEEDNNKKKKRKKFHRHTTEQIREMEALFKESPHPDEKQRQQLSKQLGLAPKQIKFWFQNRRTQIKAIQERHENSLFKSEMEKLQEENRCLRETIKKTCCPNCGCATSGADARTTTEEQQLRIENARLKAEMEKLRAIAGKYPSGAASPSSSCSTGNDRENGSSVDYYTGTFGLEKSRILEIVNQAMEELTKMATAGDPLWIRSVETGREILNYDEYIREFSPEKSCNGQVRRSIEASRETGIVFVDLPRLVQAFMDVNHWKEMFPCLISKAATIDVISTGEGANRNGAVQLMFAELQMLTPMVPTREVHFIRYCKKQSPDRWAVVDVSIDKVEDNTGSSPVKCRKRASGCIIEDKSNGHCKVIWVEHLECQKSVVHTMYRSIVSNGLAFGAKHWMATLQLQCKRLVFFMATNVPTKDSSGVATLFGRQSTLKLAQRMSQIFCRAVGASSYNTWSKLSTKWGDDIRVSSRKNLNDPGEPLGMILCAVSSVWLPVSPHILFDFLRDEARRNEWDIMSTRGSVQSIANLAKGQDRGNAVTIQATISKDSSKWVLQDSCTNAYESMVVYAPVDIASMQSVMTGCDSSNVAILPSGFSILPDGFETRPLVITSRPEEKTMDGGSLLTMAFQILVNTSATAKLTMESVENVNILMSCTLKNIKTSLQCDEDGL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00845 751 SUPERFAMILY Homeodomain-like 84 152 IPR009057 -
Eupl10g00845 751 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Eupl10g00845 751 FunFam Homeobox-leucine zipper protein GLABRA 2 264 487 - -
Eupl10g00845 751 Gene3D - 263 485 IPR023393 -
Eupl10g00845 751 Gene3D - 69 150 - -
Eupl10g00845 751 MobiDBLite consensus disorder prediction 35 101 - -
Eupl10g00845 751 ProSiteProfiles START domain profile. 255 491 IPR002913 GO:0008289
Eupl10g00845 751 CDD homeodomain 98 149 IPR001356 GO:0003677
Eupl10g00845 751 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Eupl10g00845 751 Pfam START domain 265 488 IPR002913 GO:0008289
Eupl10g00845 751 Pfam Homeodomain 95 149 IPR001356 GO:0003677
Eupl10g00845 751 SUPERFAMILY Bet v1-like 257 488 - -
Eupl10g00845 751 CDD START_ArGLABRA2_like 259 486 - -
Eupl10g00845 751 FunFam Homeobox-leucine zipper protein HDG1 79 167 - -
Eupl10g00845 751 Coils Coil 150 177 - -
Eupl10g00845 751 SMART HOX_1 92 155 IPR001356 GO:0003677
Eupl10g00845 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 90 745 IPR042160 -
Eupl10g00845 751 SMART START_1 264 488 IPR002913 GO:0008289
Eupl10g00845 751 Coils Coil 201 221 - -
Eupl10g00845 751 SUPERFAMILY Bet v1-like 511 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00845 Eupl-Chr10 27853483 27857360 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00845 91 748 Homeobox Transcription Factor Family AT1G79840 63.499 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl10g00845 START 7.3e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00845 K09338 - vvi:100256623 1144.8