Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00844 ATGGAGGTGGAGGAAGGAGATGAAGAGATCGGAGGCCGTGGCGGAGAAGTGACAGTGGAGGTTAGCAGGGAGAACACAGAAACTGGAAGATCAGAGGACGATGCCGATGTCGAGGGAGTGGAAGGGGAGGAGGATGGTGAGGAGAATAAGAACAAGAAGAAAAGAAAGAAGCTTCATAGACACACAACTGAGCAGATCAGAGCATTGGAAGCGCTATTCAAAGAGTCTTCCCATCCAAATTTGAAGCAAAGGCAACAACTGAGCAAGCAATTAGACCTTGATCCTAGGCAAATCAAGTTCTGGTTTCAAAATCGTCGAACCCAAATCAAGGCCATGCGGGAGCGCCATGAGAATTCTCTATTCAAATCGGAGATGGAAAAAATCCAAGAGGAAAATCGATCCTTGAGGGCGACCGTTAAGGCATGTTGCCCGAACTGTGGCTTTGCCACCTCTGGTGCAGATGCTAGGAGTACAACAGAGGAACAACAGCTACGAATTGAAAATGAAAGACTCAAAGATGAGTTAGAAAAATTACACGCAACTGCCGAAAATTCAAGGACAACAACAGAGGAACAACAGTTACGAATTGAAAATGAAAGACTCAAAGATGAGTTAGAAAAATTACGCGCAACTGCCGAAAACTCAAGGACAACAATTGAGGAACAACAGCTACGAATTGAAAATGCAAGACTCAAAGCTGAGTTAGAAAAATTACGCCGAACTGCCAGAAACTCAAGGACAACAACAGAAAAACAACAGCTACGAATTGAAAATGCAAGACTTGAAGCCGAGGAAATGACCAAGAGAATGGAAGCTCCTTAG 822 0.4428 MEVEEGDEEIGGRGGEVTVEVSRENTETGRSEDDADVEGVEGEEDGEENKNKKKRKKLHRHTTEQIRALEALFKESSHPNLKQRQQLSKQLDLDPRQIKFWFQNRRTQIKAMRERHENSLFKSEMEKIQEENRSLRATVKACCPNCGFATSGADARSTTEEQQLRIENERLKDELEKLHATAENSRTTTEEQQLRIENERLKDELEKLRATAENSRTTIEEQQLRIENARLKAELEKLRRTARNSRTTTEKQQLRIENARLEAEEMTKRMEAP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00844 273 Gene3D - 41 128 - -
Eupl10g00844 273 SUPERFAMILY Homeodomain-like 47 111 IPR009057 -
Eupl10g00844 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 181 243 IPR042160 -
Eupl10g00844 273 SMART HOX_1 53 116 IPR001356 GO:0003677
Eupl10g00844 273 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Eupl10g00844 273 Pfam Homeodomain 55 110 IPR001356 GO:0003677
Eupl10g00844 273 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Eupl10g00844 273 Coils Coil 118 138 - -
Eupl10g00844 273 Coils Coil 161 271 - -
Eupl10g00844 273 CDD homeodomain 59 110 IPR001356 GO:0003677
Eupl10g00844 273 MobiDBLite consensus disorder prediction 1 62 - -
Eupl10g00844 273 FunFam Homeobox-leucine zipper protein HDG1 41 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00844 Eupl-Chr10 27849507 27851607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00844 46 224 Homeobox Transcription Factor Family AT1G79840 48.421 1.01e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl10g00844 Homeodomain 1.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00844 K09338 - nnu:104592170 218.779