Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00843 ATGCAGGAGCTTTCTAATCCAAGCTATTTCGGTGCGAAGCCAAAGGTGTTCTATCAAATCGCAGAACAGCCTCTCGTCCTGCGTCAGAAATCAAGAATTTTGGAGATAGTCAACCAAGCAATGGAAGAGCTCACAAAGATGGCCACTGCAGGTGACCCCCTATGGATCCGAAGTGTTGAGAACGGCCGTGAGATACTCAATTACGATGAGTACATTCTTGAGTTCTCACCTGAGAATTCAGGCAATGGACCAGTCAGGCTATCCATCGAGGCGTCAAGGGAGACAGGTGTTGTCTCCGTGGACCTCCCCAAGCTAGTTCAAGCTTTCATGGATGTGAATCAATGGAAGGAAATGTTTCCTTGCATGATCTCCAAGGCGGCTACCATTGATGTAATCTCAAGTGGTGAAGGCGCCAACAGAAATGGTGCCGTACAACTAATGTTTGCGGAGCTACAAATGCTCACGCCAATGGTACCCACAAGACAGGTGCATTTCATCCGATATTGCAAGAAACAGAGTCCCGATCGTTGGGCAGTTGTTGATGTCTCAATTGACAAAGTTGAAGACAACACCGGTTCCTCCCCTGTAAAATGTCGAAAACGAGCATCTGGCTGCATCATAGAGGACAAGTCCAACGGCCATTGCAAGGTGATTTGGGTAGAGCACTTAGAATGCCAGAAAAGTGCTGTTCACACCATGTATCATTCTATTGTTAGCAATGGTCTGGCATTTGGAGCAACGCACTGGATGGAAACATTGCAGCTCCAGTGTGAGCGGCTTGTTTTCTTCATGGCAACCAATGTTCCCACAAAGGATTCAAGTGGGGTTGCCACATTGGTTGGAAGAAAAAGCACTCTGCAGTTGGCACAACGGATGACGCAGATCTTTTGTCGCGCAGTTGGTGCATCTAGCTATAACACATGGTCCAAGCTCTCGACTAAATGGGGAGACGACATAAGGGTGTCTGCTAGGAAGAACTTGAATGACCCAGGAGAACCTCTAGGGATGATTCTCTGTGCAGTTTCATCTGTATTTTTGCCTGTCTCTCCCCACACCCTATTTGATTTCTTAAGAGATGAAGCTCGAAGGAATGAGTGGGACACCATGTCAACTGGAGGTCCAGTACAAAGCATCGCAAACTTGGCCAAAGGAGAAGATCGAGGCAACGCGGTAACAATCCATGCGACGAAATCCAAAGATAGTAGTAAGTGGGTAATCCAGGATAGTTGCACAAATGCTTATGAGTCCATGTTAGTTTATGCTCCTGTGGATATCACCAGTATGCAATCAGTGATGACAGGATGTGACTCGAGCAACGTTGCCATATTGACTTCAGGGTTCTCAATTCTTCCTGACGGGCTCGAGACAAGGCCTCCTCTTGTGATCACCTCTAGGCCAAAAACCATGGATGGGGGATCCTTGCTTACTATAGCATTTCAAATCCTGGCTAATATATCTCCCACAGCCAAACTAACCGTTGAATCTGTCGAAAATGTTAACATTCTTGTATCACATACACTGAAGAATATTAAGACAAGCTTAGAATGTGATGAAGATGGATTATAA 1566 0.4604 MQELSNPSYFGAKPKVFYQIAEQPLVLRQKSRILEIVNQAMEELTKMATAGDPLWIRSVENGREILNYDEYILEFSPENSGNGPVRLSIEASRETGVVSVDLPKLVQAFMDVNQWKEMFPCMISKAATIDVISSGEGANRNGAVQLMFAELQMLTPMVPTRQVHFIRYCKKQSPDRWAVVDVSIDKVEDNTGSSPVKCRKRASGCIIEDKSNGHCKVIWVEHLECQKSAVHTMYHSIVSNGLAFGATHWMETLQLQCERLVFFMATNVPTKDSSGVATLVGRKSTLQLAQRMTQIFCRAVGASSYNTWSKLSTKWGDDIRVSARKNLNDPGEPLGMILCAVSSVFLPVSPHTLFDFLRDEARRNEWDTMSTGGPVQSIANLAKGEDRGNAVTIHATKSKDSSKWVIQDSCTNAYESMLVYAPVDITSMQSVMTGCDSSNVAILTSGFSILPDGLETRPPLVITSRPKTMDGGSLLTIAFQILANISPTAKLTVESVENVNILVSHTLKNIKTSLECDEDGL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00843 521 SMART START_1 35 259 IPR002913 GO:0008289
Eupl10g00843 521 FunFam Homeobox-leucine zipper protein GLABRA 2 35 258 - -
Eupl10g00843 521 ProSiteProfiles START domain profile. 26 262 IPR002913 GO:0008289
Eupl10g00843 521 Pfam START domain 36 259 IPR002913 GO:0008289
Eupl10g00843 521 SUPERFAMILY Bet v1-like 29 259 - -
Eupl10g00843 521 Gene3D - 34 257 IPR023393 -
Eupl10g00843 521 CDD START_ArGLABRA2_like 30 258 - -
Eupl10g00843 521 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 514 IPR042160 -
Eupl10g00843 521 SUPERFAMILY Bet v1-like 287 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00843 Eupl-Chr10 27846845 27849471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00843 29 518 Homeobox Transcription Factor Family AT1G79840 62.424 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00843 K09338 - ming:122068500 797.349