Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00837 ATGTCAAGTGACGAGATAAAAGGTGCCAGGGGAGCTGAAGTTCCTGTCACTGCTCCTCATAACGGGGGCAGTGATGGCTTTCCGAAAGCACGACCTTTGCATGGGAGGACTAGTGGCCCTACAAGACGCTCTACAAAGGGACAATGGACAGCTGAAGAGGATACACTATTGTGCAGAGCTGTTCAACGTTATAAAGGAAGAAATTGGAAAAAAATCGCGGAATGTTTCAAGGATCGGACTGATGTCCAGTGCCTGCACCGGTGGCAGAAGGTCTTGAATCCAGAACTTGTTAAAGGTCCTTGGTCAAAGGAGGAAGATGATATAATAATTGAGTTGGTGAATAAATATGGGGCAAAGAAGTGGTCCACCATTGCACAAGCATTACCTGGACGTATTGGAAAGCAATGTCGGGAAAGGTGGCATAATCATCTCAATCCTGCCATAAACAAGGAGGCATGGACTCAAGAAGAGGAGTTGGCTTTGATTCATGCTCATCAAATTTATGGGAACAAATGGGCCGAGTTAACAAAGTTCTTGCCTGGAAGGACAGACAATGCGATAAAAAATCATTGGAACAGCTCTGTAAAAAAGAAGTTGGACTCTTATTTGGCATCGGGGTTACTTGCACAGTTCCAAGGCCTGCCGCACGTTGGAAACCCAAACCAATGCATGCCTTCATCCTCCTTGAGGGTGCAGCAAAACAGTGGAGATAACAGTGGTCTCAAAGATGGGGCAGTAGTAGGGGAAATATCAGAATGTAGTCAAGGTTCAACTGTTGTTGGTTGCTCCCAAAATGAGTGTGACATGGCTAATACTGTTCCCACAAATGCACGAGAGGAGTTTAAATTGATAAAGGAAGGCGGTCGAAGAAATGGGCAAAGTTCTAGTTCATCATCATGTTCCAAACAATATTACACATCTCTGGAAGAAGTTACATGTGCAGTCCCAGAATTACATTGTGGAACGGGTATCTCTGCTAAGTCGTCTGAGCAAAATTTATCACATGAGGCTGGAAGTTCTGGCAATCAGGATTGCCAATTTAGTCTGCACGAGTTACCTAATACCTCTGCGCTGGAAGTAATGCAGGAACCATCAGGTTTATTTGAAACATCGAGGCATTGTATAACATGTGTGGATGAAAACCAGGAAACAGGAACTGTTCTGTTACAAAGCTCCATGGGGTTCAATGCCTCTACTTCAATGGGGAATATCATCATCCACACTGATAAACATGAGCTGGCATCAATATCTGAAGCTGATTGCTGTACAGTTACGTTCTCAGAGGCAGGGATTAATGGATGCTTTTCTTTGGGAAATCTGATGAAATGCTCAAATATCATTGACTTTGATGGATGCACAGATTCATTAATTTGCCAATCTGAAATTCAAAACTCTGAATCTGCGGGAAGTTTAGCTTCACATTCCTATTATCCATTGAGATCGTCTGATATGTTAGGAACTTCGTGTTGTCAGACTTTATTGACTGGTCCTGCTTCTTTACTTTGCCCTGATGATGAGAAACTTATATTTGGTAGTGAATGTAATGAGGTGGGAGACATGTTGAGTGGAACTCAAGACTCAGATGCCTTTATCCATCCCAGTGGCTCTACTAATTCTCCTTGTGATGGTGATATGGAGAAGATTTGCCTGCCTGTGGAGCCAGATGGGGCAAAGGATGCTTCAAAACCAATTCCCGTGGATATTTTTGGTTCGCTAACCTCTGATACTTTAGGACCTCTTCCCTGTGTGGATGAAAGCACAACTGTTAATACAGAACATCAGGATTCAGGAGCTCTATTTTATGAGCCTCCTCGTTTTCCAAGCTTGGAAATTCCTTTTTTCAGCTGTGATCTTATACCAGCTGGTGGTGATTTGCAGCAAGCTTACAGTCCACTTGGGATCCGCCAACTGATGATGTCTTCTATGAATTGCTCTACTCCATACAGCTTATGGGATTCACCATCTCGAGATGATAGTCCTGATGTTGTTTTGAAGAGTGCCGCTAAAAGCTTCTTATGCACACCATCCATTTTGAAGAAACGGCATCGTGAGCTCTTGTCGCCCTTACAGGAACGACAAAAAGACAAAAAACTTGAGAGGGACATAAATCAAGGGCTATCTTGTACATCCATGGTGACCAGAAGCGAATTTTCTTGTCTAGATGTTATTTTTGATGAAAATAGGAATTGCAGAGCTTCCATGTCATCTATTGAGGGGGCTCTTCTGACTCCAACATATTACCAGAAAAAGAATTCTGGTGCCTCCACTCAGGATAAAGAAAATTTAGACAATGGTGGCACCACATATTCAGATGTTAGAATTTCAGAGGAAACTTTTGATAGTGTAAATCCTCAGGACAACATAAAGCAGGGAACCACTGGTGTTGATGTTATGGCAAAGGTTGATGGTGATGGTACAATCCAAATGGTCCAACATCCCTCTGGAGTCCTTGTTGAACATAACATGAATGATCTTTTATTCTTTTCTCCTGATCGAGATGGTTATCCTACAAGCAGAGCATTGACTGCTGGTGCTAGGACCCCGAGATATCAATGTTCCAGGAGCTTGGAGGCTTCATCAAACCAAGGTGGCCTGATTAGCCATTCAGAATCTTCGTCAGGGAATTTATTTATTTCTCCAGCTATTGGCGGAAAGAAGCATGACAGGCATTTAGTTGCAATTACATCTGCACAATGTGATCCATTGTCACACCCGCTCGAAGTTACATTTGATACTGCTGGGAATGATGCTGACATTGAAAGATTTAGCATATATGGTGACACCCCTGCTATCAAGAGAGGGATTGAATCTCCATCGGCGTGGAAGTCCCCTTGGTTCATGAACTCTTTTCTGCCTGGTCCAAGAGTTGATACAGACATAACAATCGAGGACATAGGATATTTCATGAGCCCTGGTGATAGAAGCTATGATGCCCTTGGATTGATGAGACAGTTGAGCGAGCATACTGCAGCAGCATTGGCTGAGGCCCAGGAGGTTCTAGCAAGTGAAAATCCCGAAGTTCCGTTAAAAGAAAGACACTCTGGAGACAAGACTTTGGCACAAGAGAACAATCAATTCCCAGATAATGAGCTGGAGAACCTTATTCCTCAGCCTCCTGGTGTCTTGCCTGTCCAGACGGAACGACGAGTTCTTGATTTCAGTGGATGTGGGACACCTGGGAGGGGATCAGAGAACAGGAAATCCTCCGGGGTTGCTACTACAGTAAGTTTCTCAAGCCCATCTTCCTATTTGATGAAGGGTTGCAGGTAG 3270 0.4367 MSSDEIKGARGAEVPVTAPHNGGSDGFPKARPLHGRTSGPTRRSTKGQWTAEEDTLLCRAVQRYKGRNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDIIIELVNKYGAKKWSTIAQALPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIHAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLAQFQGLPHVGNPNQCMPSSSLRVQQNSGDNSGLKDGAVVGEISECSQGSTVVGCSQNECDMANTVPTNAREEFKLIKEGGRRNGQSSSSSSCSKQYYTSLEEVTCAVPELHCGTGISAKSSEQNLSHEAGSSGNQDCQFSLHELPNTSALEVMQEPSGLFETSRHCITCVDENQETGTVLLQSSMGFNASTSMGNIIIHTDKHELASISEADCCTVTFSEAGINGCFSLGNLMKCSNIIDFDGCTDSLICQSEIQNSESAGSLASHSYYPLRSSDMLGTSCCQTLLTGPASLLCPDDEKLIFGSECNEVGDMLSGTQDSDAFIHPSGSTNSPCDGDMEKICLPVEPDGAKDASKPIPVDIFGSLTSDTLGPLPCVDESTTVNTEHQDSGALFYEPPRFPSLEIPFFSCDLIPAGGDLQQAYSPLGIRQLMMSSMNCSTPYSLWDSPSRDDSPDVVLKSAAKSFLCTPSILKKRHRELLSPLQERQKDKKLERDINQGLSCTSMVTRSEFSCLDVIFDENRNCRASMSSIEGALLTPTYYQKKNSGASTQDKENLDNGGTTYSDVRISEETFDSVNPQDNIKQGTTGVDVMAKVDGDGTIQMVQHPSGVLVEHNMNDLLFFSPDRDGYPTSRALTAGARTPRYQCSRSLEASSNQGGLISHSESSSGNLFISPAIGGKKHDRHLVAITSAQCDPLSHPLEVTFDTAGNDADIERFSIYGDTPAIKRGIESPSAWKSPWFMNSFLPGPRVDTDITIEDIGYFMSPGDRSYDALGLMRQLSEHTAAALAEAQEVLASENPEVPLKERHSGDKTLAQENNQFPDNELENLIPQPPGVLPVQTERRVLDFSGCGTPGRGSENRKSSGVATTVSFSSPSSYLMKGCR* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00837 1089 Pfam Myb-like DNA-binding domain 101 159 - -
Eupl10g00837 1089 CDD SANT 49 92 IPR001005 -
Eupl10g00837 1089 SUPERFAMILY Homeodomain-like 95 191 IPR009057 -
Eupl10g00837 1089 MobiDBLite consensus disorder prediction 1 49 - -
Eupl10g00837 1089 Gene3D - 45 97 - -
Eupl10g00837 1089 ProSiteProfiles Myb-like domain profile. 41 92 IPR001005 -
Eupl10g00837 1089 CDD SANT 100 144 IPR001005 -
Eupl10g00837 1089 MobiDBLite consensus disorder prediction 1061 1083 - -
Eupl10g00837 1089 PANTHER MYB PROTEIN-RELATED 46 131 - -
Eupl10g00837 1089 MobiDBLite consensus disorder prediction 1054 1089 - -
Eupl10g00837 1089 SMART sant 97 146 IPR001005 -
Eupl10g00837 1089 SMART sant 149 197 IPR001005 -
Eupl10g00837 1089 SMART sant 45 94 IPR001005 -
Eupl10g00837 1089 Pfam Myb-like DNA-binding domain 46 92 IPR001005 -
Eupl10g00837 1089 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 148 IPR017930 -
Eupl10g00837 1089 Gene3D - 151 207 - -
Eupl10g00837 1089 ProSiteProfiles Myb-like domain profile. 93 144 IPR001005 -
Eupl10g00837 1089 FunFam Transcriptional activator Myb isoform A 45 97 - -
Eupl10g00837 1089 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 92 IPR017930 -
Eupl10g00837 1089 FunFam Transcriptional activator Myb isoform A 98 150 - -
Eupl10g00837 1089 ProSiteProfiles Myb-like domain profile. 145 195 IPR001005 -
Eupl10g00837 1089 Gene3D - 98 149 - -
Eupl10g00837 1089 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 199 IPR017930 -
Eupl10g00837 1089 SUPERFAMILY Homeodomain-like 44 106 IPR009057 -
Eupl10g00837 1089 FunFam Transcription factor MYB3R-2 151 213 - -
Eupl10g00837 1089 CDD SANT 152 192 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00837 Eupl-Chr10 27786447 27809293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00837 34 1062 MYB Transcription Factor Family AT4G32730 42.733 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g00837 Myb_DNA-bind_6 1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00837 - K09420 nnu:104592176 1380.93