Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00810 ATGGAAGCTGACAATCTAGTTGCACCGTTCGTATTGAAGACGTATCAGATGGTGAACGATCCGTTGACGGATTCACTGATCATGTGGGGGAGAGCAAACAACAGTTTCATTGTGATCGACCCGTTAGATTTCTCACAGAAGCTCTTACCAGCTTACTTCAAGCACAACAATTTCTCAAGCTTTGTTCGTCAGCTCAACACATACGGCTTCAGAAAGGTGGAGTCAGATAGATGGGAATTCGCAAACGAGTCTTTCCTCCGAGGCCAGAAGCAATTGTTGAAGAACATCGTTCGAAGGAAGAACAGTCGGAGTTCTTCTAATTATATGCCGCAGCCGAAGCAAGAGGAGGAGGATGAGGAAATAGTGAAGGAGCTTGAGCGGTTGAAGAAGGAGCAGAAAGATCTAGAAGAAGAGCTTGAAGGGATGGACAAGCGTTTACAGGCAACTGAGAGACGACCACAACAAATGATGGCTTTTCTTTTTAAAGTCTTGGAAGATCCAACCATTTTCCCACGAATAATTCTCGAGAAAGAGACAAGAAAGCGAGTAGGAGAGAAAAAGAGACGTCTCATGATCTCATCGTCTTCTTCATCTACGATAACCACATCAGAGATGGAGGAAGAAGCGGAGGGTGCACTGGATCAGGCTCTAATTGCACCAGAGCCCTTCGTTGCTGCTTCTACTACTACTAGTAATACTGCAACGCTACACCTGATCAATCCCATTTCTGATTATGGTAATCAAATGCTTTGCTTCCCAGAAATGGGCGGTAGGATGGAGGTAAGTTCCCCTCCTGACCCTTTTTTCTTCTTTGGAGGTGGATGTTAG 828 0.4517 MEADNLVAPFVLKTYQMVNDPLTDSLIMWGRANNSFIVIDPLDFSQKLLPAYFKHNNFSSFVRQLNTYGFRKVESDRWEFANESFLRGQKQLLKNIVRRKNSRSSSNYMPQPKQEEEDEEIVKELERLKKEQKDLEEELEGMDKRLQATERRPQQMMAFLFKVLEDPTIFPRIILEKETRKRVGEKKRRLMISSSSSSTITTSEMEEEAEGALDQALIAPEPFVAASTTTSNTATLHLINPISDYGNQMLCFPEMGGRMEVSSPPDPFFFFGGGC* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00810 275 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g00810 275 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g00810 275 Coils Coil 114 152 - -
Eupl10g00810 275 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Eupl10g00810 275 MobiDBLite consensus disorder prediction 101 120 - -
Eupl10g00810 275 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g00810 275 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g00810 275 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl10g00810 275 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 205 IPR027725 -
Eupl10g00810 275 Gene3D - 2 100 IPR036388 -
Eupl10g00810 275 FunFam Heat stress transcription factor B-4 2 100 - -
Eupl10g00810 275 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00810 Eupl-Chr10 27451592 27452600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00810 6 198 HSF AT3G24520 63.776 5.54e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl10g00810 HSF_DNA-bind 7.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00810 K09419 - vvi:100250904 278.1