Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00787 ATGGCGGTCGAATTTGGAGAGATGGAAAGACAACGCACCCGAAAACGCCCTCGCCTTGCATGGGATGTAGCTCCTGCAGAACCAGAGGCTGCTCGGTTGCCGATGCTCGCTAATGAAGGTTTGGTACGGCATGCGTCACCGCCGTGGAGGGACGACGATCGAGAAGGGCATTATGTGTTTAATCTGGGAGAGAATCTGACTTCAAGATATAAAATACTTAGCAAAATGGGTGAAGGCACATTCGGCCGTGTTTTGGAATGTTGGGACCGTCAAACACGTGAGTTTGTGGCGATTAAGGTAGTACGAAGTATACGCAAATACCGTGATGCAGCAATGATTGAAATTGATATCCTTCATCATCTTGCTAAGAATGATAGAGGCAGCTCACGTTGTGTGCAAATTCGGAACTGGTTTGATTATCGCAATCATATATGCATTGTGTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTACGGAGAAATAAATACTTCCCATTTCCTGTGGATCTTGTCCGGGAGTTCGGGCGTCAGCTTTTGGAATCTGTGGCATATATGCATGATTTACACCTAATTCACACTGACCTGAAGCCAGAAAATATACTTCTTGTGTCTTCTGAGAGTGTAAAGCTTGCAGGATGCAAGAGGAATTCACAGGATGAGATGCAATTTAGGTGCTTGCCAAAGTCAAGTGCCATAAAGCTGATTGATTTTGGTAGTACTGCGTACGACAATCAATATCATAGCTCCATCGTTTCCACAAGGCATTACCGAGCACCCGAGATTATTTTAGGTTTAGGCTGGAGTTATCCTTGTGATCTATGGAGTGTCGGTTGCATACTCGTTGAGCTCTGTTTGGGGAAAGCGTTGTTTCAGACACATGAGAACTTGGAGCACTTGGCGATGATGGAGAGGGTATTGGGACCCCTGCCAGAGAATATGATTCGAAAAGCCACTTGTGGTGCAGAGAAATATTTCAGGCGGGGAGTACGGTTGAACTGGCCTGAAGGAGCGGTTTCAAGAGAGAGTATCAGGGCTGTGAAGAAGCTTTACTGTCTGAAGGATCTGGTTTCCCAACAACTTGGGTACTCAAGGTCCTCTATAACCGACGTACTGCATGGTCTGCTGAAGTTTGATCCGTCAGAACGCCTTACTGCTCGACAAGCCCTCAACCATCCGTTCTTCACGAATCTAACTTGA 1200 0.4592 MAVEFGEMERQRTRKRPRLAWDVAPAEPEAARLPMLANEGLVRHASPPWRDDDREGHYVFNLGENLTSRYKILSKMGEGTFGRVLECWDRQTREFVAIKVVRSIRKYRDAAMIEIDILHHLAKNDRGSSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLRRNKYFPFPVDLVREFGRQLLESVAYMHDLHLIHTDLKPENILLVSSESVKLAGCKRNSQDEMQFRCLPKSSAIKLIDFGSTAYDNQYHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILVELCLGKALFQTHENLEHLAMMERVLGPLPENMIRKATCGAEKYFRRGVRLNWPEGAVSRESIRAVKKLYCLKDLVSQQLGYSRSSITDVLHGLLKFDPSERLTARQALNHPFFTNLT* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00787 399 Gene3D Transferase(Phosphotransferase) domain 1 124 395 - -
Eupl10g00787 399 SMART serkin_6 70 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00787 399 CDD PKc_CLK 57 395 - -
Eupl10g00787 399 ProSiteProfiles Protein kinase domain profile. 70 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00787 399 FunFam Serine/threonine-protein kinase AFC2 57 150 - -
Eupl10g00787 399 SUPERFAMILY Protein kinase-like (PK-like) 57 398 IPR011009 -
Eupl10g00787 399 Gene3D Phosphorylase Kinase; domain 1 57 150 - -
Eupl10g00787 399 Pfam Protein kinase domain 70 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00787 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Eupl10g00787 399 FunFam Serine/threonine-protein kinase AFC2 146 395 - -
Eupl10g00787 399 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 41 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00787 Eupl-Chr10 27152822 27162286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00787 68 398 Core Cell Cycle Gene Families AT3G48750 26.036 6.50e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Eupl10g00787 Pkinase 7.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00787 K08287 - ming:122062555 690.649