Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00781 ATGTCGTCGGAGAGTACGACAAGGTCGCCGGCACCTTTTTTGGTTCGACGAGCCTCCTCATATGGTGATATCAAGAACTTGGCTACTGTTTCCAGCAGTCTCTTGCCTGCATTCGGAACTGCTGTTGATGAAGGATATTTGCAGCTAAAACGATATATAATCGCTCCTTATGATCGAAGATACAGGTGGTGGCAGACGTTTCTCGTGGTCCTTGTCGTCTACTCTGCATGGGCATCTCCTTTCGAGCTAGCGTTCAAACATGTAGGAACCAAGTCTCTACTGCCTGTTGATTTGGTTGTGGATGGCTTCTTCGCCATTGATATCATCGTTACTTTCTTCGTCGCCTACTTAGATAAATCGACTTACCTCCTCGTGGATGATCCAAAGAAGATCGCTTTACGATACCTCACCAAGTTATGGTTTCCTATGGATGTAGCTTCAACCCTGCCATTTCAGTTAATATACAGAATTTTCACCGGAAAAATGCACGGTGGCAATGTTTTCGGTTTCCTCAACTTGCTTCGGCTGTGGCGACTCAGGCGAGTTAGCGAGCTGTTTACAAGGCTGGAGAAAGACACGCGTTTCAGCTACTTTTGGACAAGATACTGTAAACTCATTTGTGTGACTCTATTTGCGGTGCACTCAGCAGGTTGCTTCTACTATTGGATGGCCGTCAATTACCGAATAAAAAAGAAGACATGGATTGGATCACAGATAGACAATTTCCAAGACAAGAGCATCTGGATGGGCTACACCTATGCCATGTATTGGTCCATCACCACCCTCACCACCGTCGGCTATGGAGATCTGCATGCTGAGAACACTGGAGAGAAGGTGTTCAACATGTGCTTCATGCTCTTCAACATCGGCCTCACTGCTTACCTCATCGGAAACATGACCAATCTCATTGTACACGGCGCCATTCGGACCTTTGCCATGAGGGATGCCATCCATGAAATTTTGCGATATGCAAGCAAGAACCGACTTCCAGAGACCTTGAAAGAGCAGATGATGGCGCACATGCAACTCAAGTTCAAGACGACAGAGTTGCAGCAAGATGAAGTGTTTGAAGACCTTCCCAAGGCAATAAGAAGCAGCATTGCCCAACATCTCTTCAAAGGAACTCTTCTGAACGCCTACCTTTTCAAAGGAGTCACTGAAGACCTCATAGTCCAGTTGGTTTCTGAGATGAAAGCTGAATATTTTCCACCTAAAGTTGATATTATTTTACAGAATGAGATACCCACAGACTTTTACATTCTAGTCTCCGGAGCAGTGGATTTGCTGACATACAAGGATGGGACAGAGCAGTTTCTATCAAAATTAGGACCTACAGATTTAGCAGGAGAAATCGGGGTTATTTTCAATATCCCACAGCCGTTTACAGTGAGAAGCAAGAGGCTTTCCCAGGTAATTCGGATAAGTCATCAGCACTTCAAGGAAATTGTGCAGCCACAAGTTGAAGATGGAAGGACAATTATCTCAAATTTTGTTCAGTACTTGAAGGGACTAAAAGGAGAACTACTGGAGGAAATACCATTTATAACAGAACTGCTGGGTGACTTGAATAGCGAGCCTACTGTATCATGTGAGGAATTACAAAACCCTAATGCATCAACATTAAATTGCGATGGAGATGCCAACCTAGAAGGATCACCACCAACTTCGACTAGTCAATCTTTATCCATGAGGTTGGTAATCCATGGGCATCATCCAAATGAAGCCAATATGATGGAAGGCACTAAGATGGGAAAGCTAATCCATTTACCTGAATCATTAGAAGAGCTTCTGAGATTAGCAGAGAAAAAGTTCGGCAAAAGAGGGACTAAAATTCTCATGGCTGATGGCTCACAAGTGGAAGAGTTGAGTGCTTTAAGAGAGAATGATCACCTGTTTGTTTGTTGA 1905 0.4404 MSSESTTRSPAPFLVRRASSYGDIKNLATVSSSLLPAFGTAVDEGYLQLKRYIIAPYDRRYRWWQTFLVVLVVYSAWASPFELAFKHVGTKSLLPVDLVVDGFFAIDIIVTFFVAYLDKSTYLLVDDPKKIALRYLTKLWFPMDVASTLPFQLIYRIFTGKMHGGNVFGFLNLLRLWRLRRVSELFTRLEKDTRFSYFWTRYCKLICVTLFAVHSAGCFYYWMAVNYRIKKKTWIGSQIDNFQDKSIWMGYTYAMYWSITTLTTVGYGDLHAENTGEKVFNMCFMLFNIGLTAYLIGNMTNLIVHGAIRTFAMRDAIHEILRYASKNRLPETLKEQMMAHMQLKFKTTELQQDEVFEDLPKAIRSSIAQHLFKGTLLNAYLFKGVTEDLIVQLVSEMKAEYFPPKVDIILQNEIPTDFYILVSGAVDLLTYKDGTEQFLSKLGPTDLAGEIGVIFNIPQPFTVRSKRLSQVIRISHQHFKEIVQPQVEDGRTIISNFVQYLKGLKGELLEEIPFITELLGDLNSEPTVSCEELQNPNASTLNCDGDANLEGSPPTSTSQSLSMRLVIHGHHPNEANMMEGTKMGKLIHLPESLEELLRLAEKKFGKRGTKILMADGSQVEELSALRENDHLFVC* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00781 634 Gene3D - 63 305 - -
Eupl10g00781 634 Pfam KHA, dimerisation domain of potassium ion channel 564 633 IPR021789 -
Eupl10g00781 634 Pfam Cyclic nucleotide-binding domain 401 484 IPR000595 -
Eupl10g00781 634 SMART cnmp_10 381 498 IPR000595 -
Eupl10g00781 634 PRINTS EAG/ELK/ERG potassium channel family signature 251 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00781 634 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00781 634 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00781 634 PRINTS EAG/ELK/ERG potassium channel family signature 277 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00781 634 PRINTS EAG/ELK/ERG potassium channel family signature 295 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00781 634 SUPERFAMILY cAMP-binding domain-like 310 500 IPR018490 -
Eupl10g00781 634 ProSiteProfiles cAMP/cGMP binding motif profile. 381 500 IPR000595 -
Eupl10g00781 634 Pfam Ion transport protein 61 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl10g00781 634 ProSiteProfiles KHA domain profile. 564 634 IPR021789 -
Eupl10g00781 634 FunFam Potassium channel KAT2 369 505 - -
Eupl10g00781 634 SUPERFAMILY Voltage-gated potassium channels 56 304 - -
Eupl10g00781 634 FunFam Potassium channel KAT3 63 305 - -
Eupl10g00781 634 CDD CAP_ED 381 494 IPR000595 -
Eupl10g00781 634 Gene3D Jelly Rolls 346 503 IPR014710 -
Eupl10g00781 634 PANTHER POTASSIUM CHANNEL AKT1 28 503 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00781 Eupl-Chr10 27025447 27039306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00781 2 633 Ion Channels AT4G32650 58.517 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00781 K21867 - nnu:104592247 1011.52