Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00751 ATGGATTTGGAAGATAAAGTGCTTGCTAAAGTTTTTGGTGTACAGACTTTTTCTTCCAGTACTCAAAGTACCCCAGAGAAAAATGGACATTCAGATGATGCTTCAAGAGGTGAAGAGATCCTCCAAGAGTATCTCAAATCTGGTCCAAAGAAGGAACTGCTTCGCACATGCTTTGACAAAGAAAAGAAAAACTCTGTCTCATCAAAATGCAAAGTTACTGAACAACCTCTCAAAACGAGTAACAGAGGATGTAAGAACCAGGAGTTGAGAAAAACTTCTTCAAGTCAGCCTACATCGACCAACAATCAGGCTCCTTTTAGAAAGCAACAGAGGAAAGGGGAAAATCCCATCCGACTTCCGCCGCCTACAGAGCTGTCTCCAGATGTTGGGTGTCCAAGCACTTGGATCTGTAAAAATTCCGCATGTAGAGCGGTCCTAACCTCAGATGACACGTTTTGCAGGAGGTGCTCTTGCTGCATCTGTCATTTGTTTGATGACAACAAGGATCCTAGTCTTTGGTTGGTCTGCACCTCTGAATCTGGTGAACGGGACTCATGTGGCCTATCTTGCCACATCGAGTGTGCACTTCAACGCCAAAAGGTAGGGGTTGTGGATCTGGGGCAATTGATGCAGCTCGACGGGAGTTATTGCTGTGCTTCTTGTGGCAAAGTCTCTGGGATTCTTGGATGTTGGAAGAAGCAGCTTGTGATAGCCAAGGATGCTCGGCGTGTAGATGTTCTCTGCTATAGAATATCTTTGAGTTATAGGCTTTTGGATGGGACTTCCAGATTTAAAGAACTGCATGAAATAGTGGGGGATGCTAAGGCCAAGCTCGAAACAGAAGTGGGTCCAGTGAATGGAGTTTCGGCCAGGATGGCACGTGGCATTGTCAGCAGGCTCTCAATTGCTGGTGATGTGCAGAAACTCTGCTCTCTTGCCATTGAGAAGGCAGATGCATGGCTAAGCACCATTCTGAATGCCAACCCACACCACAGAGAGGATTCACTTCCTGCTGCTTGCAGGTTCCAATTTAAAGAAGTGACTTCTTCATCTCTCGTAATTGTATTGGAAGATATCTGTTCTGCATTATCTGATAATGTTAAGGGCTACAAGCTCTGGTATTGCAAGAGCAGAGAGGAGTCGCACCCAAAAGAACCCACTTGCATCTTTCCGAGAGCTCAGAGAAGAATTTTGATATCAAACCTGCAACCCTGCACAGAGTACACCTTTCGGATAATCTCATATATGGAGGCTGGCGACTTCGGTCACTCTGAGGCCAAGTGTTTCACCAAGAGTGTGGAGATAATCCACAAGCATTCTGACTCAGCAGTAGCAATGGACCATAATAATGAGAACTTGGGTGTCGAAGGAAGTTCTAGTGTGAAGAGAGAGCCCAAGATTGCAGCGGCTGTTGGACCTTCTGGTTTTAAGGTCCGAGACCTTGGAAAGATCCTGCGTCTAGCTTGGGCACAAGAAGAAGGTTGCTTTGATGGGTTTTGCAGTGCTGATGTGGAAGAATGCTGTGGTGGGAACAGTGCAATGAAACATGAAACCGTCGATGAAGACCGACCTCCATTTGTTTCACGTGAGCTTGATTTAAATGTTGTCTCAGTGCCTGATCTGAATGCAGAGATAATTCCACCAATTGAGTACTCGAGAGATGAAGTTATTGGCTGCACTTCGGAAAGGGTCATTGAGGCTGAGGACGACGTTGTTTCTCATGGGACAGAGAAGAATGGTCTAGCGAGATCAAACGGGAGTGGTGACTCACAGACCTGGGCAGTTAGGCCGATCAGAGAAGTTCCAGCTGTAGAATCTCGGACAGATTTGTGCAGGAAACGGACACTGAGCACCAATGAAGAGGCGTACGACTGTGATAGCACTCTGATCAATGGGTCACCATTGCGATTGTCCAGTGGATCCGGTCGCTTGGACGGAAGCTACGAATACTGCGTGAAGATCATCAGGTGGCTAGAATGTGGAGGGCACATCGAACAAGAATTCAGAATGAAATTTCTAACATGGTTTAGCTTGAGATCAACCGAGCAGGAGCGTAGGGTTGTGAACACCTTTATCCAGACTCTGATTGATGATCCAAGCAGCTTGGCGGGGCAGTTGGTTGACTCATTCTTGGATATCATATCCAGCAAGAGACTACGGAATGGTTTCTGTAGTAAGCTGTGGCATTGA 2190 0.4648 MDLEDKVLAKVFGVQTFSSSTQSTPEKNGHSDDASRGEEILQEYLKSGPKKELLRTCFDKEKKNSVSSKCKVTEQPLKTSNRGCKNQELRKTSSSQPTSTNNQAPFRKQQRKGENPIRLPPPTELSPDVGCPSTWICKNSACRAVLTSDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESGERDSCGLSCHIECALQRQKVGVVDLGQLMQLDGSYCCASCGKVSGILGCWKKQLVIAKDARRVDVLCYRISLSYRLLDGTSRFKELHEIVGDAKAKLETEVGPVNGVSARMARGIVSRLSIAGDVQKLCSLAIEKADAWLSTILNANPHHREDSLPAACRFQFKEVTSSSLVIVLEDICSALSDNVKGYKLWYCKSREESHPKEPTCIFPRAQRRILISNLQPCTEYTFRIISYMEAGDFGHSEAKCFTKSVEIIHKHSDSAVAMDHNNENLGVEGSSSVKREPKIAAAVGPSGFKVRDLGKILRLAWAQEEGCFDGFCSADVEECCGGNSAMKHETVDEDRPPFVSRELDLNVVSVPDLNAEIIPPIEYSRDEVIGCTSERVIEAEDDVVSHGTEKNGLARSNGSGDSQTWAVRPIREVPAVESRTDLCRKRTLSTNEEAYDCDSTLINGSPLRLSSGSGRLDGSYEYCVKIIRWLECGGHIEQEFRMKFLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFLDIISSKRLRNGFCSKLWH* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00751 729 SUPERFAMILY Fibronectin type III 342 424 IPR036116 GO:0005515
Eupl10g00751 729 MobiDBLite consensus disorder prediction 16 38 - -
Eupl10g00751 729 Pfam PHD - plant homeodomain finger protein 137 255 IPR032881 -
Eupl10g00751 729 CDD PHD_VIN3_plant 157 221 - -
Eupl10g00751 729 MobiDBLite consensus disorder prediction 81 126 - -
Eupl10g00751 729 ProSiteProfiles Fibronectin type-III domain profile. 338 435 IPR003961 GO:0005515
Eupl10g00751 729 Pfam Fibronectin type III domain 340 422 IPR003961 GO:0005515
Eupl10g00751 729 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 729 IPR044514 GO:0010048|GO:0040029
Eupl10g00751 729 Gene3D Immunoglobulins 324 428 IPR013783 -
Eupl10g00751 729 MobiDBLite consensus disorder prediction 81 109 - -
Eupl10g00751 729 CDD FN3 342 430 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00751 Eupl-Chr10 26681201 26697024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00751 133 722 PHD Gene Family AT3G24440 48.350 1.50e-175 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00751 - - nnu:104595245 1211.05