Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00734 ATGGGAGTGGATTACTACAACATCTTGAAGGTGAACAGAAATGCAACGGATGACGATCTAAAGAAGTCTTACAGGAGATTGGCCATGAGATGGCATCCAGATAAGAATCCAAACAACAAGAAGGAAGCGGAGGCCAAATTCAAACAGATCTCCGAAGCCTACGATGTCTTGAGCGATCCACAGAAAAGGGTTATCTATGATCAATATGGAGAAGAAGGGCTGAAGGGTGCCCCGCCACCAGGTTCAAGCAGCGGTGGTGGTGGTGGTGGTGGTGGATTCCCATTTGCCAATGGTAGCTCAAATGATTTTAGGTTCAATCCTCGCAACGCAGAGGATATCTTTGCCGAATTCTTTGGGAGTAGCCCATTTGGGTTCGGGTCAATGGGACCTGGGAGGTCTTCAAGGTTCCAATCGGATGGAGGGGGGATGTTTGGGGGGTTCGGTGGAGGTGGTGATAATGTCTTTCGAACATATAGCGAGGGAATGGGTGGAGGAGGCGTGCCACGGAAACCCCCACCAGTGGAGAGCAAGCTGCCATGCAGCCTTGAGGAGCTGTACGCCGGGTCAACAAGGAAGATGAAGATCTCTAGGAATGTCGTTGATGCTAACGGACGACTGGTGCCAGAATCTGAGGTCTTAACAATCGATGTGAAGCCCGGCTGGAAGAAGGGGACGAAGATAACATTCCCAGAGAAGGGGAACGAGCAAGCAAATCAACTCCCTGCAGATCTTGTGTTTGTGATCGACGAGAAGCCCCACGATGTCTACAAAAGGGATGGAAATGACCTTATCGTCAACCAGAAGGTGCCTCTTGCAGAGGCACTCTCGGGGACCACTGTGAACCTAACAACACTCGATGGACGGAACCTAACAATCCCAGTATCAGACGTCGTGAACCCTGGGTACGAGCTTGTAATCGCAAAGGAGGGGATGCCCATAGTGAAGGAACCTGGGAAAAGGGGCAACCTGAGGATAAAATTTGATGTGAAGTTCCCGGCGAGATTGACGTCGGAGCAACGGGCAGGTCTAAAGCGCATCTTGGGAGGTTGA 1050 0.5095 MGVDYYNILKVNRNATDDDLKKSYRRLAMRWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRVIYDQYGEEGLKGAPPPGSSSGGGGGGGGFPFANGSSNDFRFNPRNAEDIFAEFFGSSPFGFGSMGPGRSSRFQSDGGGMFGGFGGGGDNVFRTYSEGMGGGGVPRKPPPVESKLPCSLEELYAGSTRKMKISRNVVDANGRLVPESEVLTIDVKPGWKKGTKITFPEKGNEQANQLPADLVFVIDEKPHDVYKRDGNDLIVNQKVPLAEALSGTTVNLTTLDGRNLTIPVSDVVNPGYELVIAKEGMPIVKEPGKRGNLRIKFDVKFPARLTSEQRAGLKRILGG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00734 349 Pfam DnaJ C terminal domain 174 332 IPR002939 -
Eupl10g00734 349 Gene3D DnaJ domain 3 128 IPR036869 -
Eupl10g00734 349 CDD DnaJ 4 59 IPR001623 -
Eupl10g00734 349 MobiDBLite consensus disorder prediction 71 100 - -
Eupl10g00734 349 FunFam DNAJ heat shock family protein 252 347 - -
Eupl10g00734 349 Pfam DnaJ domain 4 67 IPR001623 -
Eupl10g00734 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 173 254 IPR008971 GO:0006457|GO:0051082
Eupl10g00734 349 SMART dnaj_3 3 62 IPR001623 -
Eupl10g00734 349 CDD DnaJ_C 172 335 - -
Eupl10g00734 349 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Eupl10g00734 349 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Eupl10g00734 349 Gene3D - 253 332 - -
Eupl10g00734 349 FunFam Dnaj homolog subfamily b member 170 251 - -
Eupl10g00734 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 341 IPR008971 GO:0006457|GO:0051082
Eupl10g00734 349 Gene3D - 173 251 - -
Eupl10g00734 349 PRINTS DnaJ domain signature 42 62 IPR001623 -
Eupl10g00734 349 PRINTS DnaJ domain signature 6 24 IPR001623 -
Eupl10g00734 349 PRINTS DnaJ domain signature 24 39 IPR001623 -
Eupl10g00734 349 PRINTS DnaJ domain signature 62 81 IPR001623 -
Eupl10g00734 349 SUPERFAMILY Chaperone J-domain 3 94 IPR036869 -
Eupl10g00734 349 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 347 - -
Eupl10g00734 349 FunFam DNAJ heat shock family protein 3 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00734 Eupl-Chr10 26316732 26319537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00734 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 1.45e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00734 K09510 - ming:122076846 526.168