Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00723 ATGGCGAAGCAAGGTCTTGGATTTGAAATTACAGAGCTGAGATTGGGTCTTCCTGGTGGTTGTCCTTCAATGGACAAAAATGAGAAGAAAAGGGTGTTCTCAAAAATCGCCGAAGACGAAAATAGCTCGACCGGAGACCAGAAAAACCACAAAAAAAATCAAATTGTGGGGTGGCCGCCAGTTTGCTCGTATCGAAAGAAGAACAATGTTCATGAGGAAAGTGGATCCAAAACAGCAAAAATGTATGTGAAAATTGGCATGGACGGCGCGCCTTTTCTACGTAAAATCGATTTGAACACTCATAAAGGGTACGCCGATCTTGCCGTTGCGTTCGAGGAGCTCTTCGGTTGTTTCGGCATCGGTGGCGTGTGGAAGGACTCCGACAGCTCGGAATATATTCCCATCTACGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTTCCTTGGGAGATGTTTATTGAATCATGCAAAAGGCTAAGGATAATGAAGAGATCGGACGCGAAGGGTTTCGGGTTGCAGTCGAGAACATCACAAGGGAATTTTCAAGGACATGCGACCGGAGAAACACGCACCGAACCCATAAGCTTAATGATTTGA 603 0.4594 MAKQGLGFEITELRLGLPGGCPSMDKNEKKRVFSKIAEDENSSTGDQKNHKKNQIVGWPPVCSYRKKNNVHEESGSKTAKMYVKIGMDGAPFLRKIDLNTHKGYADLAVAFEELFGCFGIGGVWKDSDSSEYIPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFGLQSRTSQGNFQGHATGETRTEPISLMI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00723 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 170 IPR003311 GO:0005634|GO:0006355
Eupl10g00723 200 SUPERFAMILY CAD & PB1 domains 79 165 - -
Eupl10g00723 200 Gene3D - 74 178 - -
Eupl10g00723 200 Pfam AUX/IAA family 32 172 IPR033389 -
Eupl10g00723 200 ProSiteProfiles PB1 domain profile. 80 168 IPR000270 GO:0005515
Eupl10g00723 200 FunFam Auxin-responsive protein 75 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00723 Eupl-Chr10 26105519 26108080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00723 76 185 B3 DNA Binding Superfamily AT5G20730 30.909 4.70e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Eupl10g00723 AUX_IAA 8.7e-50 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00723 K14484 - nnu:104592291 310.457