Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00722 ATGGAGAAGATATCACCAGAACCAGCAAAGGTCTTGCCGGAATCTGACGCCACCGGTCTGAATTTGAAGGAAACTGAGCTTACCTTAGGAATACCCGGTGAATCAAGAACCCCTACCGAGATTGGAGGGAAAAGCAGTGCGAAACGTGGATTCTCCAAGACCGTCGATTTGAACATCGGAAGCAAAGATCACAACGATGATCAGTCGGAAACTGAGGTCTCCAGTACTGGAAAACCCCAATCTGCAAAGGCACAAGTTGTTGGGTGGCCACCTGTCAGATCGTTTAGGAAGAGCGTATTGAAGAGCTGTACGTACGTAAAAGTAGCCGTAGACGGAGCGCCGTATCTACGAAAAGTAGACTTGGAGATATACAGTAGCTATCAGCAGCTCTTGAGCGCTCTAGAGGAGATGTTCACCTGCTTCACTATCCGTAATTATTTGAACGAGAGCAAGCTCATGGACCCTGTGAATGGAACGGAGTACGTACCTACCTATGAAGATAAAGATGGTGACTGGATGTTGGTTGGAGACGTTCCTTGGAAAATGTTCGTTACATCGTGCAAGCGTCTTCGACTGATGAAAAGCTCAGAAGCAATTGGGCTAGCTCCAAGGACCCCACCACAAAGCACAAGTACAAGATGA 642 0.4751 MEKISPEPAKVLPESDATGLNLKETELTLGIPGESRTPTEIGGKSSAKRGFSKTVDLNIGSKDHNDDQSETEVSSTGKPQSAKAQVVGWPPVRSFRKSVLKSCTYVKVAVDGAPYLRKVDLEIYSSYQQLLSALEEMFTCFTIRNYLNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFVTSCKRLRLMKSSEAIGLAPRTPPQSTSTR* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00722 213 FunFam Auxin-responsive protein 98 205 - -
Eupl10g00722 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 200 IPR003311 GO:0005634|GO:0006355
Eupl10g00722 213 Gene3D - 98 205 - -
Eupl10g00722 213 MobiDBLite consensus disorder prediction 1 83 - -
Eupl10g00722 213 ProSiteProfiles PB1 domain profile. 103 195 IPR000270 GO:0005515
Eupl10g00722 213 Pfam AUX/IAA family 101 204 IPR033389 -
Eupl10g00722 213 SUPERFAMILY CAD & PB1 domains 93 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00722 Eupl-Chr10 26099181 26101091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00722 56 205 B3 DNA Binding Superfamily AT5G62000 27.333 5.52e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Eupl10g00722 AUX_IAA 6.9e-54 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00722 K14484 - nnu:104595262 345.125