Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl10g00722 | ATGGAGAAGATATCACCAGAACCAGCAAAGGTCTTGCCGGAATCTGACGCCACCGGTCTGAATTTGAAGGAAACTGAGCTTACCTTAGGAATACCCGGTGAATCAAGAACCCCTACCGAGATTGGAGGGAAAAGCAGTGCGAAACGTGGATTCTCCAAGACCGTCGATTTGAACATCGGAAGCAAAGATCACAACGATGATCAGTCGGAAACTGAGGTCTCCAGTACTGGAAAACCCCAATCTGCAAAGGCACAAGTTGTTGGGTGGCCACCTGTCAGATCGTTTAGGAAGAGCGTATTGAAGAGCTGTACGTACGTAAAAGTAGCCGTAGACGGAGCGCCGTATCTACGAAAAGTAGACTTGGAGATATACAGTAGCTATCAGCAGCTCTTGAGCGCTCTAGAGGAGATGTTCACCTGCTTCACTATCCGTAATTATTTGAACGAGAGCAAGCTCATGGACCCTGTGAATGGAACGGAGTACGTACCTACCTATGAAGATAAAGATGGTGACTGGATGTTGGTTGGAGACGTTCCTTGGAAAATGTTCGTTACATCGTGCAAGCGTCTTCGACTGATGAAAAGCTCAGAAGCAATTGGGCTAGCTCCAAGGACCCCACCACAAAGCACAAGTACAAGATGA | 642 | 0.4751 | MEKISPEPAKVLPESDATGLNLKETELTLGIPGESRTPTEIGGKSSAKRGFSKTVDLNIGSKDHNDDQSETEVSSTGKPQSAKAQVVGWPPVRSFRKSVLKSCTYVKVAVDGAPYLRKVDLEIYSSYQQLLSALEEMFTCFTIRNYLNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFVTSCKRLRLMKSSEAIGLAPRTPPQSTSTR* | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl10g00722 | 213 | FunFam | Auxin-responsive protein | 98 | 205 | - | - | |
Eupl10g00722 | 213 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 20 | 200 | IPR003311 | GO:0005634|GO:0006355 | |
Eupl10g00722 | 213 | Gene3D | - | 98 | 205 | - | - | |
Eupl10g00722 | 213 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
Eupl10g00722 | 213 | ProSiteProfiles | PB1 domain profile. | 103 | 195 | IPR000270 | GO:0005515 | |
Eupl10g00722 | 213 | Pfam | AUX/IAA family | 101 | 204 | IPR033389 | - | |
Eupl10g00722 | 213 | SUPERFAMILY | CAD & PB1 domains | 93 | 194 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl10g00722 | Eupl-Chr10 | 26099181 | 26101091 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl10g00722 | 56 | 205 | B3 DNA Binding Superfamily | AT5G62000 | 27.333 | 5.52e-10 | 56.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Eupl10g00722 | AUX_IAA | 6.9e-54 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl10g00722 | K14484 | - | nnu:104595262 | 345.125 |