Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00718 ATGAAGAAAGAAAATACATTTACCGGTGGGTTTGGTGAACCTACTGCCAGAATCACAAGAGCTCGAGCTGCAGCCAATTGCGCATCTAGTGGGATGCTTCTCCCTAAACCATCCACGAAACAGGACCAGAAGCGGGTTCTGAGGGGGAATTCAAAAAGAGCTGCCTTGGACGAGAACAACCCCACTGCTCTGGGCACTGCAAGTCTTCAGCATAAAAGGAGGGCAGTGCTTCAGGATGTCACTAATGTCTGCTGTGAAAATTCGTATAAGAGCTGCATCAATGCAGCTAAAATTCAGACTAAGAACTGCAAGCAGGTTAAAAAAGCTCCTGTGAAGAAGGATTCCAAGGTGGCCCCTGCTATTGCTGTAGAAATTCCACGGGTTCAAAAGGATGCAGGAACAAAGATGGCTGAAGAAACAGAGAAAACAGTGATTGCTGAATCACAAGGACTTGTGTTAATCCAAGAGAGTATCGGGATTGGCATAGGAGAATGTGGTGTAGCTGATCCTCAGCTTGAGAAACAGATTTCCGGAAAGCCTTCACACTACCTGTGCCCTTCAATCAAAGACAAAGATAAGCTTTGTGAGAAATTGGGAAGTGGTCTAGACATTGCAGATATCGATTCTGACCAGAAAGATCCTCAAATGTGCAGCCTCTATGCCCCTGATATCTATAGTAATTTACGTGTTGCAGAGCTCGTTCGAAGACCTTGTTCTAATTTTATGGAAAAAGTACAGCGGGATATCACTCAAAGTATGCGAGGAATTCTGGTTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTGGCTTCGGATACCCTGTACCTCACAGTGTATCTCATTGACCGGTTTCTCTCTCAAAACTATATTGAAAGGCAACGACTTCAATTGCTTGGCATTACTTGCATGCTAATTGCATCGAAATATGAAGAAATTTGTGCACCCCGTGTGGAAGAATTCTGCTTCATCACAGACAACACTTACACAAGAGCAGAGGTACTGAATTTGGAGAGTCAAGTGCTGAACTATTTGGGTTTTCAACTATCAGCACCCACCATAAGAACCTTTCTCAGGAGATTTATTCGAGCAGCTCATGCTTCTTATAAGGCCCCTAGTCTCGAGTTGGAGTTCTTGGCAAATTATTTAGCTGAACTGTCTCTGGTTGACTATGGGTTCCTCAAGTTTCTTCCTTCCCTCATAGCCGCATCTGCTGTATTCCTTGCCAGATGGACGCTAAATAAATCATGCCACCCATGGAATCCGACTCTAGAGCACTATTCCAGTTACAAGGCACCGGATTTGAAAGCTACAGTTCTTGCACTGCAAGATTTGCAAATGAACACCAATGGCCATCCTCTGAATGCTATACGTGAAAAGTACAGGCAACATAAGTTTAAGTGTGTGTCGGCTTTGTTGTCCCCACCACCACTCGATACGCTCTTCTGA 1449 0.4438 MKKENTFTGGFGEPTARITRARAAANCASSGMLLPKPSTKQDQKRVLRGNSKRAALDENNPTALGTASLQHKRRAVLQDVTNVCCENSYKSCINAAKIQTKNCKQVKKAPVKKDSKVAPAIAVEIPRVQKDAGTKMAEETEKTVIAESQGLVLIQESIGIGIGECGVADPQLEKQISGKPSHYLCPSIKDKDKLCEKLGSGLDIADIDSDQKDPQMCSLYAPDIYSNLRVAELVRRPCSNFMEKVQRDITQSMRGILVDWLVEVSEEYKLASDTLYLTVYLIDRFLSQNYIERQRLQLLGITCMLIASKYEEICAPRVEEFCFITDNTYTRAEVLNLESQVLNYLGFQLSAPTIRTFLRRFIRAAHASYKAPSLELEFLANYLAELSLVDYGFLKFLPSLIAASAVFLARWTLNKSCHPWNPTLEHYSSYKAPDLKATVLALQDLQMNTNGHPLNAIREKYRQHKFKCVSALLSPPPLDTLF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00718 482 CDD CYCLIN_AtCycA-like_rpt2 352 466 - -
Eupl10g00718 482 PIRSF Cyclin_A_B_D_E 20 480 IPR046965 GO:0016538|GO:0044772
Eupl10g00718 482 ProSitePatterns Cyclins signature. 254 285 IPR006671 -
Eupl10g00718 482 SUPERFAMILY Cyclin-like 212 349 IPR036915 -
Eupl10g00718 482 Pfam Cyclin, C-terminal domain 352 474 IPR004367 -
Eupl10g00718 482 Gene3D - 223 471 - -
Eupl10g00718 482 SMART Cyclin_C_2 352 476 IPR004367 -
Eupl10g00718 482 SUPERFAMILY Cyclin-like 352 475 IPR036915 -
Eupl10g00718 482 Pfam Cyclin, N-terminal domain 223 350 IPR006671 -
Eupl10g00718 482 FunFam Cyclin A1 339 471 - -
Eupl10g00718 482 Gene3D - 237 350 - -
Eupl10g00718 482 MobiDBLite consensus disorder prediction 29 59 - -
Eupl10g00718 482 PANTHER CYCLINS 186 463 IPR039361 -
Eupl10g00718 482 FunFam Mitotic cyclin 6 237 337 - -
Eupl10g00718 482 CDD CYCLIN_AtCycA_like_rpt1 213 348 - -
Eupl10g00718 482 SMART cyclin_7 356 444 IPR013763 -
Eupl10g00718 482 SMART cyclin_7 259 343 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00718 Eupl-Chr10 26041961 26054445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00718 1 482 Core Cell Cycle Gene Families AT1G80370 55.714 4.86e-172 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00718 K06627 - nnu:104595267 655.981