Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00707 ATGTCTCAGACCAACTGGGAAGCTGATAAAATGTTGGACGTGTATATTTATGATTATTTAGTGAAAAGGAATTTACAGGCTTCGGCAAAGGCATTTCAAGCTGAAGGGAAAGTGTCTTCCGACCCCGTGGCCATCGATGCGCCTGGTGGTTTTCTCTTTGAATGGTGGTCTGTTTTTTGGGATATCTTCATTGCTAGGACAAATGAGAAACATTCTGAAGTTGCGGCATCTTACATTGAGACTCAACTAATCAAAGCACGAGAGCAGCAGCATCAACAACAACAACAGCAGCCACCCCAGCAGCAGCATCATCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAGATGCAGATGCAGCAGCTGTTATTGCAGAGGCATGTACAACAGCAGCACCAGCAACAACAGCAACAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGAGAAGAGAGGGAACCCACCTTCTCAATGGAACTGCCAATGGGCTCGTCGGGAGTGACCCTCATATGCGGCCGAACACTGGAACTGCAAATGCCTTGGCTGCGAAGATGTACGAGGAACGGTTAAAGCTGCCGCATCAAAGGGATTCTTTAGAAGATGCAGCTATGAAGCAAAGGTTTGGTGACAACATGGGCCAGCTTATGGATCCAAACCATGCTTCTATGTTGAAGTCAGCTGTAGCAGCTGGCCAGCCTTCTGGGCAAGTGTTGCATGGTACAGCTGGTGGTATGTCAGGGACTCTTCAGCAAGTGCAAGCTCGGAACCAGCAGCTTCCGGGGTCTACGCCGGAAATAAAGAGCGAGATGAATCCAGTATTGAACCCTAGAGCTGCAGGTCCTGATGGATCGTTGATTGGAGTTCCTGGTTCAAATCAAGGTGGTAACAATTTGACTTTGAAAGGATGGCCACTCACGGGACTTGATCAGCTTCGCTCTGGGCTTCTTCAGCAGCAAAAGCCATTCATACAGTCCCCTCAGCCTTTTCATCAACTTCAGTTGCTGACTCCACAGCAGCAGCAGCAACTTCTGCTTCAGGCACAGCAAAATTTGTCCTCCCCATCTGCCAATGATGTTGACAGCAGAAGATTGAGAATGCTTCTTAATCGGAATATGAGTCTTGGGAAGGATGGCCAGTCCAATTCTGTTGGTGATGTAGTTCCAAATGTCGGATCGCCAATGCAACCTGCGTGCCCTGTTTTACCTCGTGGAGGAGATACAGAGATGCTAATTAAGAAAATAGCTCAGTTACAGCAGCAGCAGAACAGCAATCAACAGCAGCAACAGCTTCAGCAGCATGCACTTTCAAGTCAGCATTCTCAGAGTTCAAACCACCACCTTCACCAGCAAGAAAAAATGGGGGGTGCTGGCAGCGTCACGGTGGATGGTAGCATGTCAAACTCCTTTCGAGGAAATGATCAGGCTTCAAAAAATCAGGGAGGGCGAAAGAGGAAGCAACCTGTGTCTTCTGGTCCTGCCAACAGTTCCGGAACTGCGAACACGGCTGGACCCTCCCCAAGTTCAGCACCCTCGACACCGTCGACTCATACCCCGGGAGATGTGATTTCAATGCCTACTTTGCCACACGGTGGTAGCTCCTCAAAGCCTTTGCTTATGTTTGGCTCTGATGGAACTGGAACTCTTACATCACCATCAAATCAACTGTGGGATGATAAAGATCTTGAATTGCAGGCTGAAATGGATCGGTTTGTGGATGATGGATCCTTGGATGATAACGTTGAGTCGTTCTTATCTCATGATGATAACGACCCTAGAGATACGGTTGGCCGTGGCATGGATGTCAGCAAAGGGTTTACCTTTACAGAGGTTCGTTATATTCGAGCAAGTTCAAGTAAAGTTGTATGTTGCCACTTCTCATCAGATGGGAAACTACTTGCTAGTGGTGGGCATGATAAAAAGGCTGTACTGTGGCACACGGATTCTTTAAAGCAGAAGACCACACTGGAAGAACATTCTTTATTGATTACTGATGTTCGCTTCAGTCCAAGCATGCCGCGTCTGGCTACCTCTTCTTTTGACAAAACTGTCAGGGTTTGGGATGCTGACAATCCAGGCTATTCACTTCGCACGTTTACGGGACATTCTGCCTCTGTTATGTCACTGGACTTCCACCCAAACAAAGAGGATATCATCTGCTCATGTGATGGAGACAGTGAGATACGATACTGGAGTATCAACAATGGTAGCTGTTCCAGAGTCTTCAAGGGTGGCACAACACAGATGAGATTTCAACCCCGTCTCGGAAGGTATCTTGCGGCTGCTGCTGAGAATGTTGTTTCGATACTGGATGTTGAGACCCAAGCTTGCCGGCATTCCTTACAGGGACATACAAAACCAGTACATTCTGTATGTTGGGATCCTTCTGGTGATCTGTTAGCATCTGTGAGTGAGGACTCCGTCAGAGTCTGGACACTTGGCTCTGGGAATGAAGGGGAGTGTGTGCACGAGTTGAGCTGTAATGGCAACAAATTCCACTCCTGTGTTTTCCATCCCTCATATCCTTCTCTGTTGGTAATTGGATGTTATCAGTCTCTGGAACTTTGGAACATGGCTGAGAACAAGACAATGACTTTGTCTGCGCACGAAGGACTCATTGCTGCTCTGGCAGTGTCAAATGTGACAGGTTTAGTGGCTTCTGCTAGTCACGACAAGTTCGTCAAGCTCTGGAAGTGA 2724 0.4794 MSQTNWEADKMLDVYIYDYLVKRNLQASAKAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQHQQQQQQPPQQQHHQQQQQQQQQQQQQQQQQMQMQQLLLQRHVQQQHQQQQQQQQQQQQQQQQQQQQQQRREGTHLLNGTANGLVGSDPHMRPNTGTANALAAKMYEERLKLPHQRDSLEDAAMKQRFGDNMGQLMDPNHASMLKSAVAAGQPSGQVLHGTAGGMSGTLQQVQARNQQLPGSTPEIKSEMNPVLNPRAAGPDGSLIGVPGSNQGGNNLTLKGWPLTGLDQLRSGLLQQQKPFIQSPQPFHQLQLLTPQQQQQLLLQAQQNLSSPSANDVDSRRLRMLLNRNMSLGKDGQSNSVGDVVPNVGSPMQPACPVLPRGGDTEMLIKKIAQLQQQQNSNQQQQQLQQHALSSQHSQSSNHHLHQQEKMGGAGSVTVDGSMSNSFRGNDQASKNQGGRKRKQPVSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPTLPHGGSSSKPLLMFGSDGTGTLTSPSNQLWDDKDLELQAEMDRFVDDGSLDDNVESFLSHDDNDPRDTVGRGMDVSKGFTFTEVRYIRASSSKVVCCHFSSDGKLLASGGHDKKAVLWHTDSLKQKTTLEEHSLLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFTGHSASVMSLDFHPNKEDIICSCDGDSEIRYWSINNGSCSRVFKGGTTQMRFQPRLGRYLAAAAENVVSILDVETQACRHSLQGHTKPVHSVCWDPSGDLLASVSEDSVRVWTLGSGNEGECVHELSCNGNKFHSCVFHPSYPSLLVIGCYQSLELWNMAENKTMTLSAHEGLIAALAVSNVTGLVASASHDKFVKLWK* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00707 907 Gene3D - 752 907 IPR015943 GO:0005515
Eupl10g00707 907 MobiDBLite consensus disorder prediction 548 565 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 623 664 IPR001680 GO:0005515
Eupl10g00707 907 ProSitePatterns Trp-Asp (WD) repeats signature. 684 698 IPR019775 -
Eupl10g00707 907 MobiDBLite consensus disorder prediction 427 565 - -
Eupl10g00707 907 MobiDBLite consensus disorder prediction 263 303 - -
Eupl10g00707 907 Pfam LisH 10 36 IPR006594 GO:0005515
Eupl10g00707 907 Pfam WD domain, G-beta repeat 785 820 IPR001680 GO:0005515
Eupl10g00707 907 Pfam WD domain, G-beta repeat 870 907 IPR001680 GO:0005515
Eupl10g00707 907 Pfam WD domain, G-beta repeat 626 654 IPR001680 GO:0005515
Eupl10g00707 907 Pfam WD domain, G-beta repeat 704 741 IPR001680 GO:0005515
Eupl10g00707 907 Pfam WD domain, G-beta repeat 662 697 IPR001680 GO:0005515
Eupl10g00707 907 SMART Lish 8 40 IPR006594 GO:0005515
Eupl10g00707 907 Coils Coil 133 162 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 708 750 IPR001680 GO:0005515
Eupl10g00707 907 MobiDBLite consensus disorder prediction 263 279 - -
Eupl10g00707 907 SMART WD40_4 783 821 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 744 780 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 701 741 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 658 697 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 827 866 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 616 655 IPR001680 GO:0005515
Eupl10g00707 907 SMART WD40_4 868 907 IPR001680 GO:0005515
Eupl10g00707 907 CDD WD40 619 907 - -
Eupl10g00707 907 Coils Coil 105 125 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 708 746 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 665 700 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 790 830 IPR001680 GO:0005515
Eupl10g00707 907 FunFam Transcriptional corepressor LEUNIG 602 753 - -
Eupl10g00707 907 PANTHER TRANSCRIPTION ACTIVATOR MSS11 2 907 - -
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 665 700 IPR001680 GO:0005515
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats profile. 875 907 IPR001680 GO:0005515
Eupl10g00707 907 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Eupl10g00707 907 MobiDBLite consensus disorder prediction 470 531 - -
Eupl10g00707 907 SUPERFAMILY WD40 repeat-like 616 907 IPR036322 GO:0005515
Eupl10g00707 907 MobiDBLite consensus disorder prediction 427 459 - -
Eupl10g00707 907 MobiDBLite consensus disorder prediction 89 109 - -
Eupl10g00707 907 Gene3D - 603 751 IPR015943 GO:0005515
Eupl10g00707 907 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 875 907 - -
Eupl10g00707 907 FunFam Transcriptional corepressor LEUNIG 754 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00707 Eupl-Chr10 25639326 25658404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00707 702 906 Miscellaneous Gene Families AT5G08390 24.762 1.37e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Eupl10g00707 WD40 0.11 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00707 - - nnu:104595274 1281.54