Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00703 ATGGAGGGAAGTAAAGGTGGTGGTGAAAATGACAGCTCGAGCGAGGGACGGCCTCCGAATCCACTCGCTGAAGCTTATCGACAGGGTTTGAGTAGTGCTCGTGTCGCGTCGTCTTGCAAGAAAACACTTGTTCGTCACACATCTCTCCAGGTGAAGAGGACAACAGATGTTTCGTTTGGGCCTGATGTGGTTGGGGAGGGTTGTGAATCAGAGTTCTTTCCGATTGTTCGCTCTGGGGCTTGGGCCGACATTGGGTTTCGCCGGAGCATGGAGGATGTGTATGTTTGTGTTGATGATTTCTTGTGTGATTATGGGCTTAAGAGTTTTGGCGATGGGCCTAATGCCTTCTATGGGGTCTTTGATGGGCATGGAGGAAAGCATGCCGCCGACTTTGCCTGCAACAATTTGCCAAGATTCATCCTAGAGGATGAAGACTTTCCAAGGGAGATTGAGAGGGCTGTTGCTTCTGCTTTTCTGCAAACCGACACTGCTTTTGCAGAAGCTTGCTCCGTGGATGCTGCTCTAGCTTCTGGTACCACTGCACTGGCAGCTCTTGTTGTTGGGAGATCATTGGTGGTGGCAAATGCTGGGGACTGCAGGGCAGTACTTTGCCGTCGGGGCAAAGCAGTTGAGATGTCAAGGGATCACAAGCCGGTCTGCACCAGAGAGAGGAAGCGAATAGAAGCATCAGGGGGTTATGTCTATGACGATTACCTCAATGGGCAACTCAATGTTGCCCGTGCTCTGGGGGACTGGCACATGGAAGGAATGAAGGATCAGGATGGTGGGCCCCTCAGTGCGGAGCCCGAAGTGAAGACGACAATGCTGACAGAGGAGGATGAATTCCTGATCATAGGCTGTGATGGGATCTGGGATGTCTTCAGGAGCCAGAACGCCGTGGACTTTGCCCGGCGGAAGCTCCAGGAGCATAATGACCCAATCACTTGTTGTAAGGAGCTGGTGGATGAGGCCCTGAAGAGGAAGAGTGGGGACAACTTAGCTGTCGTGGTGGTCTGCTTCCATTCGAAGCCACCACCGAACCTGGTGGCTCCCCGTGTTCGAGTGCAGCGGAGCATATCGGCTGAGGGTTTTAGGGAGTTGCAGAGCTTCTTGGATAGCTTGGGGAATTGA 1131 0.5287 MEGSKGGGENDSSSEGRPPNPLAEAYRQGLSSARVASSCKKTLVRHTSLQVKRTTDVSFGPDVVGEGCESEFFPIVRSGAWADIGFRRSMEDVYVCVDDFLCDYGLKSFGDGPNAFYGVFDGHGGKHAADFACNNLPRFILEDEDFPREIERAVASAFLQTDTAFAEACSVDAALASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAVEMSRDHKPVCTRERKRIEASGGYVYDDYLNGQLNVARALGDWHMEGMKDQDGGPLSAEPEVKTTMLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPITCCKELVDEALKRKSGDNLAVVVVCFHSKPPPNLVAPRVRVQRSISAEGFRELQSFLDSLGN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00703 376 CDD PP2Cc 76 340 IPR001932 -
Eupl10g00703 376 ProSiteProfiles PPM-type phosphatase domain profile. 77 340 IPR001932 -
Eupl10g00703 376 PANTHER PROTEIN PHOSPHATASE 2C 45 338 IPR015655 GO:0004722|GO:0006470
Eupl10g00703 376 Gene3D - 66 344 IPR036457 -
Eupl10g00703 376 FunFam Probable protein phosphatase 2C 22 64 343 - -
Eupl10g00703 376 SMART PP2C_4 67 338 IPR001932 -
Eupl10g00703 376 Pfam Protein phosphatase 2C 85 332 IPR001932 -
Eupl10g00703 376 ProSitePatterns PPM-type phosphatase domain signature. 116 124 IPR000222 GO:0043169
Eupl10g00703 376 SUPERFAMILY PP2C-like 70 342 IPR036457 -
Eupl10g00703 376 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00703 Eupl-Chr10 25540232 25561210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00703 1 376 PP2C-type Phosphatase Gene Family AT2G25620 64.796 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Eupl10g00703 PP2C 1.3e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00703 K14803 - nnu:104592316 632.098