Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00697 ATGATGGGTTCACCTTCGGAACTAAGTCAAGACTGCAAACCCCACAATTATTCTTTGCTTCTAAAGTCGTTTGGAGATCAGCCTGATCAGACTCAGAAACTTGAAGAGTTCCTTGCTCGTCTCGAAGAGGAATGGCTCAAGATCGATGCGTTCAAGCGCGAGCTACCACTTTGCATGCAACTTCTCACCAACGCCATGGAGGCTTCTAGGCAGCAGCTACAGACCTACCGGACAAACCCAGGGCCGAGACCGGTGCTCGAAGAATTCATACCTCTCAAACATTCAAACTCAGAAGGATCAGAGAAAGCAGCAAACATATCCGATAAGGCAAGTTGGATGACATCGGCACAACTATGGAGCCAATCCAACGATGGAAACAAACAAAAATCCACAACAGCGTCTCCAAAAGAAAACGATCAGAGTTTTCCCAAGCTAGCTTTGGATAACAAGCAAAGAAATGGAGGAGCTTTTCTTCCATTCTCGAAAGAAAGGAACACATGTTCAAGTCCTACATTACGTGTTCTTCCCGATTTAGCTCTTGCTTCTGGAGATAAAGAGATTGATCAGGATAAAAAATGCTCGGAATTGGAGAACGGGATGTCTTGCTCAAGGAGAGAGAATTTCAACAAGGGTGGCGGTGGAGGAACGTTGTCTGAGCAAGGAAAGGGAGCGGGAAATCAGGCAGAAACGCAGGCTAACACGACAACAAATCAGACGCACAGGAAAGCAAGGAGGTGTTGGTCACCAGATTTGCACCGTCGGTTTGTGAATGCTCTTCAGATGTTGGGTGGGTCCCAAGTAGCCACCCCAAAACAAATCAGGGAGTTGATGAAGGTTGATGGTTTGACCAATGATGAAGTCAAGAGCCATTTACAGAAATATAGACTACACACTCGAAGACCGAGCCCCAGCCCACAAGCGGCTGGAGCCCCAACACCCCAGCTCGTAGTCTTGGGTAGCATCTGGGTTCCACCGGAATACGCAAGTGCAGCTGCAGCGCACGGTGCCAACACTGCCATCTACGGTGCACATCCTGCTTCCCTTGCTTCAACACACTACTGTACGCCGCCAGTGCCACAGGAGTTTTATCCTGCGCAAACCCACCAGTTGCATCACAGTCTTCACCACCAACACCACATCTACAAGACCTCCTCTCAGGCACATAGCTCGCCGGAATCTGACATGAGGGGTGCCGGAGACCGTTCGGAAAGCATCGAAGACGGGAAGTCCGATAGTAGTAGCTGGAAAGGAGATAGTGTGAGAACGTAG 1269 0.4925 MMGSPSELSQDCKPHNYSLLLKSFGDQPDQTQKLEEFLARLEEEWLKIDAFKRELPLCMQLLTNAMEASRQQLQTYRTNPGPRPVLEEFIPLKHSNSEGSEKAANISDKASWMTSAQLWSQSNDGNKQKSTTASPKENDQSFPKLALDNKQRNGGAFLPFSKERNTCSSPTLRVLPDLALASGDKEIDQDKKCSELENGMSCSRRENFNKGGGGGTLSEQGKGAGNQAETQANTTTNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGAPTPQLVVLGSIWVPPEYASAAAAHGANTAIYGAHPASLASTHYCTPPVPQEFYPAQTHQLHHSLHHQHHIYKTSSQAHSSPESDMRGAGDRSESIEDGKSDSSSWKGDSVRT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00697 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 242 297 IPR006447 GO:0003677
Eupl10g00697 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 416 IPR044787 GO:0003700|GO:0006355
Eupl10g00697 422 MobiDBLite consensus disorder prediction 394 422 - -
Eupl10g00697 422 SUPERFAMILY Homeodomain-like 239 300 IPR009057 -
Eupl10g00697 422 MobiDBLite consensus disorder prediction 204 244 - -
Eupl10g00697 422 Gene3D - 241 299 - -
Eupl10g00697 422 Pfam Myb-like DNA-binding domain 244 295 IPR001005 -
Eupl10g00697 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 239 299 IPR017930 -
Eupl10g00697 422 Coils Coil 59 79 - -
Eupl10g00697 422 MobiDBLite consensus disorder prediction 117 142 - -
Eupl10g00697 422 FunFam Myb family transcription factor 241 299 - -
Eupl10g00697 422 MobiDBLite consensus disorder prediction 374 422 - -
Eupl10g00697 422 MobiDBLite consensus disorder prediction 220 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00697 Eupl-Chr10 25372922 25375097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00697 2 363 G2-like Transcription Factor Family AT2G03500 54.712 4.14e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl10g00697 Myb_DNA-binding 8.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00697 - - qsu:112031181 619.387