Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00694 ATGCCTCACGGTCAGATGAAAGACCCACAAGAGAAGCACGTGGTTTCTCGGAAACCACTGCAGAATTCCATGAATCAACAGAAACCCTCTTCCCAACCGTTACAGAACTGTGTGGTTTGCTTGCAAGATACAAAGAAGAGTATAGGAAGAAGAAGAGGAAGGGGGAGAGGGAAAGGTGTTCAAGTAGAAAGTTTGAAGCAAGCGGAGCTTGATCTTCATGTGGAACCTCCAGTTTCGAGCAAAGGTCTCATGTTCCATCGGCGTCCTGGCTATGGCCAAGCGGGTACCAAGTGCATTGTTAAAGCCAACCATTTCCTTGCAGAGTTACCTGACAAGGACTTGAATCACTATGATGTTACGATAACCCCTGAGGTGACTTCTCGTAGCATGAACAGAGCTATTATGGCTCAGTTGGTGAAACTCTATAGAGAGACTGATTTGGGGATGAGGCTTCCTGCTTATGATGGAAGGAAGAGCCTTTACACAGCTGGGTTGCTTCCGTTTACCTCAAAGGAGTTCAATATAACTCTGGTTGATGAAGATGATGGGACGGGTATTATAAGAGAGCGAGAATTTAAAGTGGTAATCAAGTTCGTAGCTCGCGCCAACCTGCATCACTTGCGCCAGTTTCTTGCTGGAAAACAAGCTGACGCTCCTCAAGCTGCTCTCCAGATTCTTGATATTGTCTTAAGGGAACTTTCGAGCCAAAGGTATATATCAATTGGGAGATCCTTTTATTCCCCGGAGATTAGAAAACCGCAACGTCTAGGTGATGGGTTACAATCATGGTGTGGTTTCTACCAGAGTATAAGACCAACTCAGATGGGCTTGTCACTTAATATTGATATGTCCTCAGCTGCTTTCATTGAACCACTCCCTGTAATTGAGTTTGTAGCTCAAGTTTTGGGCAAAGACATATTGTCAAGGCCGTTGTCTGATGCAGATCGCATCAAGGTTAAGAAATCCCTCAGAGGGGTCAAAGTTGAAGTTACACATAGAGGAAATGTACGAAGGAAATACCGTGTGTCGGGGTTGACATCACAGCCTACGAGGGAACTAATTTTTCCGGTTGATGAGCAAATGAATATGAAATCAGTTGTTGAATACTTTCAAGAAATGTATGGATTTACCATTCAGCATTCCCATCTTCCTTGCCTTCAAGTGGGAAATCAAAAGAAGGCAAATTATTTGCCAATGGAGGCTTGTAAGATTGTTGAGGGACAGAGATATACAAAAAGGTTGAATGAGAAGCAGATAACTTCTTTGCTAAAAGTCACGTGCCAAAGACCTCGGGACCAAGAAATGGACATTTTGCAGACAGTTCAACAAAATGGGTATGAGCAAGATCCCTATGCAAAGGAGTTTGGCATCAGTATAAGTGACAAGCTTGCATCAGTTGAAGCTCGAGTTCTTCCTGCCCCATGGCTGAAATATCATGATACTGGGAAAGAGAAAGATTGTTTGCCTCAGGTTGGTCAGTGGAATATGATGAACAAGAAAATGATAAATGGAAGCACTGTAAATTACTGGGCTTGTATCAACTTTTCACGAAGCGTTCAACAAAGCACCGTTCGTGGTTTTTGTCACGAGCTGGCACAGATGTGCCAAGTCTCTGGCATGGAATTCAACCGTGAACCTGTAATTCCAATCTATTCAGCAAGGCCCGATCAAGTAGAGAAGGCACTGAAATATGTGTACAACGCAGCGATGAACGAACTTAAAGGGAAAGATTTGGAGCTACTTATTGCCATTCTTCCCGACAACAATGGTTCTTTGTATGGTGATCTCAAGCGAATTTGTGAAACCGATTTAGGGTTGATATCCCAGTGCTGTCTAACAAAGCACGTCTTTAAGATAAACAAACAGTACCTGGCGAATGTTTCACTTAAAATCAATGTCAAGATGGGAGGAAGAAATACGGTACTCTTAGATGCTCTATGTTGGAGAATTCCTTTGGTTAGTGACATTCCCACAATAATATTTGGAGCTGATGTAACTCATCCTGAGACTGGAGAGGACTCTAGTCCATCAATCGCTGCGGTTGTAGCGTCCCAAGATTGGCCTGAAGTTACAAAATATGCTGGACTGGTATGTGCTCAGGCTCATAGACAAGAGCTTATTCAGGACTTGTTCAAAACCTGGCACGATCCTCAACGGGGTACAGTTACTGGAGGCATGATCAGGTGA 2187 0.4353 MPHGQMKDPQEKHVVSRKPLQNSMNQQKPSSQPLQNCVVCLQDTKKSIGRRRGRGRGKGVQVESLKQAELDLHVEPPVSSKGLMFHRRPGYGQAGTKCIVKANHFLAELPDKDLNHYDVTITPEVTSRSMNRAIMAQLVKLYRETDLGMRLPAYDGRKSLYTAGLLPFTSKEFNITLVDEDDGTGIIREREFKVVIKFVARANLHHLRQFLAGKQADAPQAALQILDIVLRELSSQRYISIGRSFYSPEIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSSAAFIEPLPVIEFVAQVLGKDILSRPLSDADRIKVKKSLRGVKVEVTHRGNVRRKYRVSGLTSQPTRELIFPVDEQMNMKSVVEYFQEMYGFTIQHSHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDQEMDILQTVQQNGYEQDPYAKEFGISISDKLASVEARVLPAPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGSTVNYWACINFSRSVQQSTVRGFCHELAQMCQVSGMEFNREPVIPIYSARPDQVEKALKYVYNAAMNELKGKDLELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINKQYLANVSLKINVKMGGRNTVLLDALCWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWHDPQRGTVTGGMIR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00694 728 SMART PAZ_2_a_3 296 428 IPR003100 GO:0005515
Eupl10g00694 728 Gene3D - 649 725 IPR036397 GO:0003676
Eupl10g00694 728 MobiDBLite consensus disorder prediction 1 15 - -
Eupl10g00694 728 SUPERFAMILY Ribonuclease H-like 466 712 IPR012337 -
Eupl10g00694 728 SUPERFAMILY PAZ domain 286 446 IPR036085 GO:0005515
Eupl10g00694 728 Pfam Argonaute linker 2 domain 435 478 IPR032472 -
Eupl10g00694 728 SMART DUF1785_2 239 291 IPR014811 -
Eupl10g00694 728 MobiDBLite consensus disorder prediction 16 34 - -
Eupl10g00694 728 Pfam Piwi domain 581 710 IPR003165 GO:0003676
Eupl10g00694 728 MobiDBLite consensus disorder prediction 1 34 - -
Eupl10g00694 728 Gene3D paz domain 285 410 - -
Eupl10g00694 728 Pfam Mid domain of argonaute 489 567 IPR032473 -
Eupl10g00694 728 Pfam Argonaute linker 1 domain 240 289 IPR014811 -
Eupl10g00694 728 CDD PAZ_argonaute_like 291 405 - -
Eupl10g00694 728 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 77 714 - -
Eupl10g00694 728 Pfam N-terminal domain of argonaute 97 230 IPR032474 -
Eupl10g00694 728 ProSiteProfiles PAZ domain profile. 292 406 IPR003100 GO:0005515
Eupl10g00694 728 Gene3D - 470 643 - -
Eupl10g00694 728 Pfam PAZ domain 318 422 IPR003100 GO:0005515
Eupl10g00694 728 ProSiteProfiles Piwi domain profile. 580 728 IPR003165 GO:0003676
Eupl10g00694 728 FunFam Argonaute 10 470 643 - -
Eupl10g00694 728 FunFam Protein argonaute-2 285 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00694 Eupl-Chr10 25324555 25335251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00694 85 728 Eukaryotic Initiation Factors Gene Family AT5G43810 82.508 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00694 K11593 - nnu:104595287 1321.99