Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00688 ATGGGACCGTTCGATTCAGGCATCTCTGCTGGAAGCTGTAGCAGTAGTTCGTCCTCCTGCGCTCGAAAACCGTCCGATATCGATGGATTTCTTGCCAGCGCTGGGTACAAGGTCAAGTCATCAGATCTCCGGCAAGTCGCGCAGCGTCTCGAGCAGCTTGAGACTGTGATGGTCAACGCTCCAGCTGAGATCTCCCAACTCGCTTCCGAGGCCGTACATTACAACCCCTCTGACATGGCTTCCTGGGTCGACTCCATGCTCTCTGAGCTTAATCAGCCTGCACCCTTGTCGTCTGATCTATCAGATTTTTCTGATCTCGGTTACATCGACGATTTCGTCGCTCCGTCACTCCATCAGACGGTAGTGACAGACGGGTGGACGGACCAGAATACGCATCCGCAACAGCAACAGTTGACGGTGGTAGCAGCGATGGAAGAAGATTCCGGCATCAGGTTGGTACATTTGCTGATGACGTGTGCGGAGTCAGTTCAACGTGGCGAGGTAAGATTGGCTGGATCCTTGATAGAAGAGATGCGTACCATATTAACACGTGTCAACACGGGATGCGGCATCGGCAAGGTAGCAGGGTACTTCATCGAGGCTCTGAGCCGCCGGCTCTTCTCGCCGCAGGCCGTGTCTGCCGGCTCGACATCTGAGAACGAGATCTTGTACCATCACTTCTACGAGGCTTGTCCCTACCTCAAATTCGCTCACTTTACCGCTAATCAAGCCATCCTTGAAGCATTCGACGGCCATGATTGTGTCCACGTGATTGATTTCAACTTGATGCAAGGACTACAATGGCCAGCGCTGATCCAGGCTCTTGCTCTCCGTCCTGGTGGGCCCCCCTTCCTCCGGTTGACAGGCATCGGTCCACCCTCAACAGACGGGCGCGACTCGCTCCGCGAAATTGGGTTACGACTCGCCGAGTTAGCTTATTCCGTTAACGTCCGGTTCGCCTTTCGAGGTGTGGCAGCTTCACGACTCGATGACGTGAAGCCGTGGATGCTCCAAGTGGGCCCAGGAGAAGCAGTAGCCGTTAATTCAATAATGCAGCTCCACCGGCTGCTTGTCACTGATCCAAGCCGTGGCTCACCAATCGACCCGGTTCTAGACTGGATCCAGAGCTTAAACCCGAAGATCGTGACTGTGATAGAGCAAGAAGCGGATCACAACCGACCCGAATTCCTCGACCGATTTACGGAGGCACTGTACTATTATTCAACCATGTTTGATTCGCTAGAGGCGTGTGCACTGCAACCAGCAAAAGCTGTTGCTGAGATGTACATACAGAGGGAGATATGTAACGTCGTGTGTTGCGAAGGCTCGGCTCGAGTGGAGCGCCATGAACCGTTGGCTAAGTGGAGGGATCGGCTTACGGGAGCCGGCTTCAAACCGTTACATCTTGGATCGAATGCGTTCAAGCAAGCAAGCATGTTATTGACTTTGTTCTCAGCCGAAGGATACTGCATCGAGGAGAACGATGGGTGCTTGACGCTCGGCTGGCATAGCCGACCTCTCATTGCTGCTTCCGCATGGCAAGCCGCGCCAGAAAAGACGAGCCGCTCTCAAGAATAA 1578 0.5399 MGPFDSGISAGSCSSSSSSCARKPSDIDGFLASAGYKVKSSDLRQVAQRLEQLETVMVNAPAEISQLASEAVHYNPSDMASWVDSMLSELNQPAPLSSDLSDFSDLGYIDDFVAPSLHQTVVTDGWTDQNTHPQQQQLTVVAAMEEDSGIRLVHLLMTCAESVQRGEVRLAGSLIEEMRTILTRVNTGCGIGKVAGYFIEALSRRLFSPQAVSAGSTSENEILYHHFYEACPYLKFAHFTANQAILEAFDGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPFLRLTGIGPPSTDGRDSLREIGLRLAELAYSVNVRFAFRGVAASRLDDVKPWMLQVGPGEAVAVNSIMQLHRLLVTDPSRGSPIDPVLDWIQSLNPKIVTVIEQEADHNRPEFLDRFTEALYYYSTMFDSLEACALQPAKAVAEMYIQREICNVVCCEGSARVERHEPLAKWRDRLTGAGFKPLHLGSNAFKQASMLLTLFSAEGYCIEENDGCLTLGWHSRPLIAASAWQAAPEKTSRSQE* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00688 525 Pfam Transcriptional regulator DELLA protein N terminal 28 94 IPR021914 -
Eupl10g00688 525 SMART DELLA_2 28 100 - -
Eupl10g00688 525 MobiDBLite consensus disorder prediction 1 22 - -
Eupl10g00688 525 Gene3D - 26 90 IPR038088 -
Eupl10g00688 525 FunFam DELLA protein GAI 26 90 - -
Eupl10g00688 525 MobiDBLite consensus disorder prediction 8 22 - -
Eupl10g00688 525 ProSiteProfiles GRAS family profile. 143 514 IPR005202 -
Eupl10g00688 525 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 144 510 IPR005202 -
Eupl10g00688 525 Pfam GRAS domain family 152 514 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00688 Eupl-Chr10 25276409 25278251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00688 27 514 GRAS Transcription Factor Family AT1G14920 49.608 6.00e-165 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl10g00688 GRAS 1.1e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00688 K14494 - nnu:104592329 858.981