Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00678 ATGTCTGGTTCGATAATGGCGGGGGCATCCAGTTCGTGGTCACACGCACTGGTACAGATCTCTCCTTACACCTTCTCGGCCATCGGAATCGCAATCTCCATCGGTGTTTCTGTGTTGGGTGCTGCTTGGGGGATCTACATAACTGGAAGTAGTTTGATTGGTGCCGCAATCAAAGCTCCTCGCATCACTTCTAAGAATCTCATCAGTGTAATTTTCTGCGAGGCCGTCGCTATATATGGTGTTATTGTGGCAATCATCTTACAAACAAAGCTCGAAAGCGTGCCTGCATCCAACTTATATGCAGCTGAGTCTCTTAGAGCCGGATATGCAATCTTTGCCTCTGGGATCATTGTGGGCTTCGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATAATTGGAAGCAGCTGTGCATTGTCGGATGCCCAGAACTCCTCGCTTTTTGTGAAGATTTTAGTGATCGAGATCTTTGGCAGCGCGCTCGGGTTGTTCGGAGTGATAGTTGGCATAATCATGTCAGCTCAAGCAACATGGCCATCAAAGGCAGTGTGA 549 0.4882 MSGSIMAGASSSWSHALVQISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASNLYAAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKAV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00678 182 Pfam ATP synthase subunit C 28 87 IPR002379 GO:0015078|GO:0033177|GO:1902600
Eupl10g00678 182 Pfam ATP synthase subunit C 112 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Eupl10g00678 182 SUPERFAMILY F1F0 ATP synthase subunit C 21 90 IPR035921 -
Eupl10g00678 182 Gene3D - 23 178 IPR035921 -
Eupl10g00678 182 CDD ATP-synt_Vo_c_ATP6F_rpt2 107 171 - -
Eupl10g00678 182 CDD ATP-synt_Vo_c_ATP6F_rpt1 25 87 - -
Eupl10g00678 182 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 9 175 - -
Eupl10g00678 182 SUPERFAMILY F1F0 ATP synthase subunit C 105 172 IPR035921 -
Eupl10g00678 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 67 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Eupl10g00678 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 123 149 IPR000245 GO:0033179|GO:0046961|GO:1902600
Eupl10g00678 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 41 65 IPR000245 GO:0033179|GO:0046961|GO:1902600
Eupl10g00678 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 150 173 IPR000245 GO:0033179|GO:0046961|GO:1902600
Eupl10g00678 182 FunFam V-type proton ATPase proteolipid subunit 23 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00678 1 180 Primary Pumps ATPases(2) AT2G25610 91.111 3.97e-109 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00678 K03661 - aew:130765483 308.145