Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00658 ATGGACAAGAGAAAGCTTGCGGTTCCTCTCGTCTGCCATGGCCATTCGCGCCCGGTAGTTGATTTGTTCTACAGTCCAGTTACGCCAGATGGGTTTTTCCTCATCAGCGCGAGCAAGGATTCCAGTCCCATGCTGAGAAATGGAGAAACTGGAGACTGGATTGGAACCTTTGAAGGGCATAAGGGTGCTGTTTGGAGTTGCTGCCTAGATACAAATGCTTTACGGGCTGCATCAGGCTCAGCTGATTTTACTGCGAAAATATGGGATGCTTTGACTGGTGACGAACTACATTCATTCGAGCACAAGCACATTGTTCGGGCATGTGCCTTTTCGGAGTTTGAACGGGTGACTAACCTGCTCGGCAATGCCACTGCACTGTTGACTCAGTCTGACAATGAATTCATGTCATTTCCATTCAATAGTTCTGGATAA 432 0.4792 MDKRKLAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASGSADFTAKIWDALTGDELHSFEHKHIVRACAFSEFERVTNLLGNATALLTQSDNEFMSFPFNSSG* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00658 143 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Eupl10g00658 143 Gene3D - 9 132 IPR015943 GO:0005515
Eupl10g00658 143 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 57 89 - -
Eupl10g00658 143 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Eupl10g00658 143 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 8 122 - -
Eupl10g00658 143 SUPERFAMILY WD40 repeat-like 3 114 IPR036322 GO:0005515
Eupl10g00658 143 SMART WD40_4 50 89 IPR001680 GO:0005515
Eupl10g00658 143 SMART WD40_4 5 47 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00658 9 116 Eukaryotic Initiation Factors Gene Family AT2G46280 37.963 8.70e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00658 K13137 - nnu:104595313 236.884