Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00655 ATGAAGGGGGAATTACAGCTAGAACCATCGGGAGATCGGAATCCAAACGACTCCGATCCTCTGCTGGAGAACCAGGCGAATGAGATAAAAGATGAAGAGATCGAAGCTTCTTCGGCTGCTTGTTGTCGAATTTGCCTCGAGTACGACGGCGAACCAGATGAAGACTTGATATCTCCATGCATGTGCAAAGGCACTCAGCAGTTTGTTCATCGTTCATGCCTCGATCATTGGCGCTCAGTGAAGGAAGGATTTGCTTTTTCGCACTGCACGACTTGCAAGGCACAATTCCATCTTCGAGTCGAATTTTTAGAGGACTATTCTTGGCGTAAAATGAAGTTCCGAATTTTTGTTGCCAGAGATGTTCTCCTTGTCTTCTTGGTGGTACAAACTGCAATTGCTGCTATTGGTGGCTTTGCATACTTCATGGACAAAAATGGAAACTTCAGGAATTCGTTCAGTGATGGTTGGGACCGTATACTGTCAAAGCATCCGATACCCTTCTACTACTGTATAGGTGTACTGGCCTTCTTAGTTATGCTGGGATTTTTTGGGCTGATACTACATTGCTCCTCCATCAACAATAACGATCCATGCTTGGCCGGCTGCCGGAACTGCTGCTACGGATGGGGCATCTTGGACTGCTTCCCAGCATCTATGGAAGCATGCTTTGCCCTGGTTATCATTTTTGTCATCATCTTTGCCATCCTCGGCATTGCATATGGTTTTCTCGCTGCCACCATGGCCATCCAGAGGATCTGGCAGAGACACTATCACATCCTCACCAAGAGGGAACTCACAAAGGAGTACGTAGTGGAGGATCTTCGTGGGTGTTATACTCCACCAAAGCTGGACCAGGAACATGAAGAGCGTCTGAAAATGCTCAAGCTTTTGTAG 894 0.4698 MKGELQLEPSGDRNPNDSDPLLENQANEIKDEEIEASSAACCRICLEYDGEPDEDLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEFLEDYSWRKMKFRIFVARDVLLVFLVVQTAIAAIGGFAYFMDKNGNFRNSFSDGWDRILSKHPIPFYYCIGVLAFLVMLGFFGLILHCSSINNNDPCLAGCRNCCYGWGILDCFPASMEACFALVIIFVIIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLRGCYTPPKLDQEHEERLKMLKLL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00655 297 SMART ringv_2 41 93 IPR011016 GO:0008270
Eupl10g00655 297 Pfam RING-variant domain 42 92 IPR011016 GO:0008270
Eupl10g00655 297 CDD RING_CH-C4HC3_MARCH 42 93 - -
Eupl10g00655 297 ProSiteProfiles Zinc finger RING-CH-type profile. 34 99 IPR011016 GO:0008270
Eupl10g00655 297 MobiDBLite consensus disorder prediction 1 22 - -
Eupl10g00655 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 105 IPR013083 -
Eupl10g00655 297 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 8 297 - -
Eupl10g00655 297 SUPERFAMILY RING/U-box 37 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00655 Eupl-Chr10 24859487 24867594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00655 1 297 C3H Transcription Factor Family AT1G11020 73.125 7.27e-160 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00655 - - nnu:104592342 572.392