Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00650 ATGGCGGAAAGAGGGGTCTGGGGGGTTTCTATGTGTGGTCAGCAGATTGAGCAGATGTCGAGAGACGGAAGCCATTACAGCCTTTCGAGCGGGATTCTTCCCTCGCTTGGAGCAAGGAGCAATCGTAGAGTAAAGCTTCGTAGATTCATTATTTCTCCTTATGATCGTCATTACAGAGGATGGGAGACTTTTCTGGTTGTTCTGGTCCTCTACACCGCCTGGGTATCTCCATTTGAATTTGGATTCCTCGAGAAACCGAAGGGAGGTCTCTCCATTGCCGATAATGTCGTTAATGGGTTCTTTGCCGTGGATATTGTCCTTACGTTCTTCGTCGCCTACCTCGACAGAGCTACTTACCTCCTCATCGACAGCCCGAAGCAGATTGCTTGGAGGTATTTTAGCACCTGGTTGGCCTTCGATGTCATTTCCACAATCCCCACGGAAGTTGCTCGAAAGATGTTGCCCCCAAGTCTCCGAACCTACGGCTTCTTCAACATGCTTCGACTCTGGCGTCTCCGAAGAGTCAGTGCCTTGTTTGCCAGACTGGAGAAAGATAGGAACTTCAACTACTTTTGGGTTCGATGTGCGAAGCTTATCTGTGTAACTCTATTTGCAGTTCACTGTGCTGGGTGTTTCTATTATCTTATTGCTGCACGTTACCATGATCCCCAAAGGACTTGGATTGGTGCATCTATGGATAACTTCCATGATCAGAGCCTATGGATCCGTTATGTGACATCGATTTACTGGTCCATCACTACTCTCACAACCGTTGGCTATGGTGATTTGCATCCTCAGAATACAAGGGAGATGATCTTTGACATCTTCTACATGCTCTTCAACCTTGGATTGACAGCATATCTGATCGGGAATATGACCAATTTAGTTGTCCATGGGACCAGTCGAACTAGAAAATTTAGGGATACCATTCAAGCAGCCTCGAGTTTTGCACAAAGGAATCAACTCCCACCTCGCCTGCAAGATCAGATGCTTGCACACTTGTGCTTGAAGTTCAGAACGGACTCAGAGGGGCTGCAGCAGCAAGAGACTCTTGATTGCCTCCCTAAAGCTATCCGATCAAGTATTTCACATTTTCTCTTCTACTCTCTCGTCGATAAGGTGTACTTGTTTCGTGGGGTATCGAATGACTTGCTTTTCCAGCTGGTCTCAGAGATGAAAGCAGAGTATTTCCCTCCCAAAGAAGATGTGATTTTGCAGAACGAAGCACCCACTGACTTTTATATTCTGGTTACTGGTGCTGTGGATCTTGTGGTACTCAGGAACGGAACAGAACAGGTTGTTGGAGAGGCAAAGACGGGAGATCTTTGCGGCGAGATTGGGGTACTTTGTTACAAGCCACAGCTGTTCACTGTCCGCACCAAACGATTGAGTCAGCTGCTGCGGTTAAACCGTACTTCATTTTTGAACATCGTTCAGGCCAATGTTGGAGATGGGACCATAATCATGAACAATCTCCTTCAGCATTTGAAAGATCTGAAGGACCCAATGATGGAAGGAGTTTTGACGGACACAGAGAACATGCTAGCTCGGGGTAGATTGGACCTCCCTCTCAGTCTATGCTTCGCAACGATTAGAGGAGATGATCTTCTGTTGCATAAGTTACTGAAACGGGGTTTGGATCCAAATGAATCGGACAACAATGGGCGAACGGCTCTGCATATAGCGGCATCGAAAGGAAATGAAAATTGTGTTCTCCTTCTACTAGATTATGGGGCAGATCCTAATAGCAGAGATTCGGAAGGAAATGTTCCCCTATGGGAAGCACTACTGGGGAGGCATGAAAAGGTGATCAAAATACTGATGGACAATGGTGCAAACATATTTTCTGGCGATGTGGGTCATTTTGCATGCACTGCCGCTGAGCAAAATAGTTTAGACTTGCTCAAGGACATAGTACATTATGGAGGGGACGTCACAGTGCCCAAGAGCAACGGAAATACTGCACTCCATGTTGCAGTTTGTGAGGGGAACATCGAAGTAGTCAAGTTTTTGTTCGACCAAGGGGCCGATATTGACAAACCTGACTTACATGGTTGGACACCAAGGAAGCTGGCAGACCAGCAGGCCCACGAAGAGATAAAAGCTCTCTTCCAAGCCAAACAAGAAACCAAAAAACAAACTGCCGTTATATTCCCTGAGTCAGGGGTGCGGTTCATCGGGAGGTTCAAAAGTGAACCTTCAATGCGCCCTCCCTCCCACGAAGGCACAACCGACACTGGAGATGTGCTGTGGGGGGGAAACCGTCGGAGGCGCAAGACTAGCAACTTCCATAACTCACTTTTTGGGATCATGTCAGTTGCAGGTGACAAGGGCCCACTTTCATCAATGGCCCGATTGGGCACTCCAAATTGCGGGGGTTTCACTGGTAGAGTGACCATTAGTTGCCCGGAGCGGAGTGAAGTCGCTGGAAAGCTTGTGCTCCTGCCGGGGTCCCTTCAAGAGTTACTTGCGATTGGTGCTAGCAAATTTGGAATCGATGCCACCAAAGTCCTAACCAATGATAGAGCTGAAATTGATGATATAGCTCTGATTAGAGATGGTGATCACCTTATTCTTATTACTGATAATGGGGTGTCAGAACCAAACAACCAAATTGTATAG 2622 0.4714 MAERGVWGVSMCGQQIEQMSRDGSHYSLSSGILPSLGARSNRRVKLRRFIISPYDRHYRGWETFLVVLVLYTAWVSPFEFGFLEKPKGGLSIADNVVNGFFAVDIVLTFFVAYLDRATYLLIDSPKQIAWRYFSTWLAFDVISTIPTEVARKMLPPSLRTYGFFNMLRLWRLRRVSALFARLEKDRNFNYFWVRCAKLICVTLFAVHCAGCFYYLIAARYHDPQRTWIGASMDNFHDQSLWIRYVTSIYWSITTLTTVGYGDLHPQNTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDCLPKAIRSSISHFLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLRNGTEQVVGEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTSFLNIVQANVGDGTIIMNNLLQHLKDLKDPMMEGVLTDTENMLARGRLDLPLSLCFATIRGDDLLLHKLLKRGLDPNESDNNGRTALHIAASKGNENCVLLLLDYGADPNSRDSEGNVPLWEALLGRHEKVIKILMDNGANIFSGDVGHFACTAAEQNSLDLLKDIVHYGGDVTVPKSNGNTALHVAVCEGNIEVVKFLFDQGADIDKPDLHGWTPRKLADQQAHEEIKALFQAKQETKKQTAVIFPESGVRFIGRFKSEPSMRPPSHEGTTDTGDVLWGGNRRRRKTSNFHNSLFGIMSVAGDKGPLSSMARLGTPNCGGFTGRVTISCPERSEVAGKLVLLPGSLQELLAIGASKFGIDATKVLTNDRAEIDDIALIRDGDHLILITDNGVSEPNNQIV* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00650 873 ProSiteProfiles cAMP/cGMP binding motif profile. 376 478 IPR000595 -
Eupl10g00650 873 FunFam Potassium channel SKOR 59 297 - -
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat profile. 587 619 IPR002110 GO:0005515
Eupl10g00650 873 Pfam Ankyrin repeats (3 copies) 527 614 IPR002110 GO:0005515
Eupl10g00650 873 Pfam Ankyrin repeats (3 copies) 626 681 IPR002110 GO:0005515
Eupl10g00650 873 Pfam Ion transport protein 60 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat region circular profile. 587 614 - -
Eupl10g00650 873 CDD CAP_ED 376 481 IPR000595 -
Eupl10g00650 873 FunFam Potassium channel KAT2 364 500 - -
Eupl10g00650 873 Gene3D Jelly Rolls 340 501 IPR014710 -
Eupl10g00650 873 SMART ANK_2a 651 680 IPR002110 GO:0005515
Eupl10g00650 873 SMART ANK_2a 554 583 IPR002110 GO:0005515
Eupl10g00650 873 SMART ANK_2a 587 616 IPR002110 GO:0005515
Eupl10g00650 873 SMART ANK_2a 521 550 IPR002110 GO:0005515
Eupl10g00650 873 ProSiteProfiles KHA domain profile. 797 873 IPR021789 -
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat region circular profile. 554 585 - -
Eupl10g00650 873 Gene3D - 522 706 IPR036770 -
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat profile. 554 586 IPR002110 GO:0005515
Eupl10g00650 873 SMART cnmp_10 376 493 IPR000595 -
Eupl10g00650 873 Pfam KHA, dimerisation domain of potassium ion channel 797 859 IPR021789 -
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat region circular profile. 651 682 - -
Eupl10g00650 873 SUPERFAMILY Ankyrin repeat 525 704 IPR036770 -
Eupl10g00650 873 PANTHER POTASSIUM CHANNEL AKT1 24 862 IPR045319 GO:0005249|GO:0006813
Eupl10g00650 873 SUPERFAMILY Voltage-gated potassium channels 53 297 - -
Eupl10g00650 873 PRINTS Ankyrin repeat signature 555 570 IPR002110 GO:0005515
Eupl10g00650 873 PRINTS Ankyrin repeat signature 667 681 IPR002110 GO:0005515
Eupl10g00650 873 Pfam Cyclic nucleotide-binding domain 396 480 IPR000595 -
Eupl10g00650 873 SUPERFAMILY cAMP-binding domain-like 301 496 IPR018490 -
Eupl10g00650 873 MobiDBLite consensus disorder prediction 730 755 - -
Eupl10g00650 873 ProSiteProfiles Ankyrin repeat profile. 651 683 IPR002110 GO:0005515
Eupl10g00650 873 Gene3D - 61 297 - -
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 105 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl10g00650 873 PRINTS EAG/ELK/ERG potassium channel family signature 270 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00650 Eupl-Chr10 24780953 24787892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00650 17 862 Ion Channels AT2G25600 65.035 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00650 K21867 - nnu:104592345 1403.65