Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00625 ATGGATTCTCCTGAAAGCAATCAGGTCGTCGTCTCTACATCAACATCTCCCGCAGTTCAAGACTCCCCCTTCTCCAGTTTCCTTAGCAACCTCTCTCCAATAAAGCCAGACAAGGCTTTACATGTTGCACAAGGGTTTCCGGAACTTAGTTTTCCTCCCCCACCGCCAGTGTTTACGTCACCACGAATTAATCCACAACGAGAAACAAGTTTTCTGAAGAGGTCCCAGTGTCCTGGCTCATCCAGTGCAGGACTCTCTCTTGAGCATGACAACAGAGGCAAGATATTTGCAGCAGGTTCAGATTTTTCTGGACCATCTATTACTCAATCGATTGTTGGGTTGATTCCTTGCTCGCAGAAGGAATGTCCTAGTAAGGGCTCTGTGCAAGTCCAACCCTGCAGCCCTTCACAGTGTGTCGATGAATACCTGGTTGATCATGTGGAGGTGGAGGACTGTGTGAATACTGATTCAGCCGATTTATTGTTGAAACAAGCTAATGGTGCGACTCAAGCATTACAAAGTGGCTGTACCAGCTCGAAAGAAACCATTGTGAAGCTTGATGATGATGACAGGAGGAAAGACACAGGGATTGAAGTGGCTGCACCTCTGACCTCATTAGAGCAAGCTGAAGAAGACCTACTAGGGAAGTCACTGTTCCATGTTAAATCAGTGGAACCTGAAGGCGAGCAGAAGGATAGTGAAAGGCCGACTGATAAGTGCTCAGATGTAATGCCTGAGAAAGTCAATGATCTTGTTCCATCAAATTTGTCTCTGGAACCTGCTCCTGGTGCACAACATTGCCAGCATGTAGCGGCTCAAAATGTTGCTCTAGATTCTTTTTCTATTATGACAAAGAAAGGGGAACAGGACAATGCAGAATTTGATAAGGAAAGGTCTACTTGTTCTAGAAGTCTTCGTTCCCATGGATCACAAGATGTTAAGCTACAGAATGCAGAAGGTGGACAGCAAGGTGAATGGGACTGTACCCCTCAGTTACTGCCCGAACCGTTGCAGATTGTACATCCATATGAAAATTGTGGTGAGAATTCAGGAGCAATATCAGATGGATCTCTTGAGAACAAGATGCCATATGATTTTGAGGAGGCCGGTCAACACCAACGTGTTACACGTAGACGCTGTCTTCAATTTGAGGCTGCAGAGGCTTGCAGAGATAGCAGTTCTTGGAATCCAACAGACATTATTCCCAATTCAAGGTTACCCGCAAATCCTACAGAATTGGAGATCTTGGATTCATCTCATTTGGAATCAAGTGTGACTTCGAACAACAGGCAACCAGTCCACTTCTCCCAACCTGTAACTTACGGGCTCTCTCTTTGCCCACTTAAAACACCAGAAACCTGCGTTGAGAAGATTGATAGATCTGTTCGAATTGGTAGAAACTCTTCCATAACTGCTCCCATGCCATCTGGTATCGGCTTGCACTTAAATAGCATTGTCAATGCTGCAGCAATGGGCTGCAGTGCAGCTGCAAGCATGAAATTAGCTGAAAAGGATTATCCGAGTGCACAAAGGGAGAAGTCGCCGTCTGTGATTGAGCAACATTTACCCGAAGACACAAAAACTAGCTCACTTCCAGCAAGTGAGGTTGGGAAATTTGCAGCCAACACTAGTGATGATCAGCATGAAAGTCTTGCCATAGCAAGTTCCACCACTTTCCACTCCTCTCATGGTAAAAAACCTCAGGACAATACTCTGCAGTTGAAACTTATTGAGCATCAGACAACTCCATGTGATAAGAGAAAGTTTGCTTTAGAAAATGCTGACAAGTTCGAGGAGTCTGACCAACTAGGCCCCAAAAAGAAGAGGAAGAAGACATCATATACCATTGAGAATGACGGCTGCAAACGTTGCAACTGTAAGAGGTCAAAATGCTTGAAACTTTATTGCGAGTGCTTTGCTGCAGGAGTATATTGTGCTGAACCTTGTACTTGCCAAGACTGCTTCAACAAGCCTGAATATGAAGATACAGTGCTTGGGACCCGGCAACAAATCGAGTCCCGCAATCCACTTGCATTTGCTCCAAAGATAGTACGGCGTGTCACCGAGTCTCCAGCAAACAGTGGGGAAGATGGTAACCGGATGACACCATCCTCAGCCAGGCATAAAAGAGGATGCAATTGCAAGAAGTCCATGTGTCTGAAAAAATATTGTGAATGCTATCAGGCTGGAGTTGGATGTTCCGATGGATGCCGATGTGAGGGATGCAAGAATATTTTTGGCATAAAAGAAGGATATGGTGAAATCACAGAAATGGTATACAGAAGGGCTGATGATGGGTGGGAGGACCTGTCCGACGAGAAGCTGGAAATGGCAGAGACCAGGAGTGATTTCTTACAGCTAGATCAGTGCCATCCACACAACCTCTCTCCCCTAACACCATCATTCCAGTACTCAAACCACGGAAAGGACATGCCAAAATCCCGGCTTCCTGCTGGAAGATATCTCCAATCACCAGAATCTGACATTATCATTTCATCTCCTCATGGGACATCCACAGATTTTTTAGAAATTTAA 2535 0.4525 MDSPESNQVVVSTSTSPAVQDSPFSSFLSNLSPIKPDKALHVAQGFPELSFPPPPPVFTSPRINPQRETSFLKRSQCPGSSSAGLSLEHDNRGKIFAAGSDFSGPSITQSIVGLIPCSQKECPSKGSVQVQPCSPSQCVDEYLVDHVEVEDCVNTDSADLLLKQANGATQALQSGCTSSKETIVKLDDDDRRKDTGIEVAAPLTSLEQAEEDLLGKSLFHVKSVEPEGEQKDSERPTDKCSDVMPEKVNDLVPSNLSLEPAPGAQHCQHVAAQNVALDSFSIMTKKGEQDNAEFDKERSTCSRSLRSHGSQDVKLQNAEGGQQGEWDCTPQLLPEPLQIVHPYENCGENSGAISDGSLENKMPYDFEEAGQHQRVTRRRCLQFEAAEACRDSSSWNPTDIIPNSRLPANPTELEILDSSHLESSVTSNNRQPVHFSQPVTYGLSLCPLKTPETCVEKIDRSVRIGRNSSITAPMPSGIGLHLNSIVNAAAMGCSAAASMKLAEKDYPSAQREKSPSVIEQHLPEDTKTSSLPASEVGKFAANTSDDQHESLAIASSTTFHSSHGKKPQDNTLQLKLIEHQTTPCDKRKFALENADKFEESDQLGPKKKRKKTSYTIENDGCKRCNCKRSKCLKLYCECFAAGVYCAEPCTCQDCFNKPEYEDTVLGTRQQIESRNPLAFAPKIVRRVTESPANSGEDGNRMTPSSARHKRGCNCKKSMCLKKYCECYQAGVGCSDGCRCEGCKNIFGIKEGYGEITEMVYRRADDGWEDLSDEKLEMAETRSDFLQLDQCHPHNLSPLTPSFQYSNHGKDMPKSRLPAGRYLQSPESDIIISSPHGTSTDFLEI* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00625 844 MobiDBLite consensus disorder prediction 688 710 - -
Eupl10g00625 844 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 812 IPR044522 GO:0003700
Eupl10g00625 844 MobiDBLite consensus disorder prediction 224 244 - -
Eupl10g00625 844 SMART CXC_2 619 660 IPR033467 -
Eupl10g00625 844 SMART CXC_2 707 748 IPR033467 -
Eupl10g00625 844 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 710 744 IPR005172 -
Eupl10g00625 844 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 622 657 IPR005172 -
Eupl10g00625 844 ProSiteProfiles CRC domain profile. 620 747 IPR005172 -
Eupl10g00625 844 MobiDBLite consensus disorder prediction 506 530 - -
Eupl10g00625 844 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00625 Eupl-Chr10 24414289 24429272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00625 603 751 CPP Transcription Factor Family AT3G22760 70.000 3.28e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Eupl10g00625 TCR 7.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00625 K21776 - nnu:104595334 919.072