Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00615 ATGGCTACCACAACCCGGGATGAATCCGACTACGATAGTAGCTGTTCGTCGATCACGGTACCGGATTCGGGTCATAGCTGGATAAGCGACCTGAGCTTTGGAAGCAGAAGCTCCATCTCTGTGTGTTCCTACAATGAAAACAGCCTTTATGGTGGTCACAAGCCACACAAAGCGAACCAAGCTGCTTGGGAGGCTATGAAGAGACTCAGAGGCGAAAAGGGTCGGGTTGGGTTAGACCACTTTCGGCTTCTACGCCGGGTTGGAAGCGGCGACCTCGGTAATGTCTACCTGTGTCAGCTTAGAAACCCGGTTGTGGGGTTGCCTGAGTGCTTGTACGCCATGAAAGTGGTTGATAGAGAATCTCTAGCGTTTAGGAAGAAGCTTCAGAGAGCAGAGATGGAGAAGGAGATATTGGGTATGCTTGATCACCCGTTTCTTCCTACTCTGTATGCAGAGTTTGACGCTTCTCACTACTCTTGTCTTGTCATGGAGTTTTGTCCTGGTGGTGACTTGCATGCAGTCCGGCAACGCCAACAAGGGAAGCGATTTAGCATCTCCTCTGCCAAGTTCTATGCGTCGGAGATCCTCCTAGCACTGGAGTATCTTCACATGATGGGGATTGTTTACAGAGACCTTAAGCCAGAAAATGTTCTTGTTAGAGAAGATGGCCACATCATGCTCTCCGACTTCGATCTTTCCCTCAAATGCGACGTTGTACCAAAGCTTCTAAGACCCAAAATGGACCCTGAAACCATGAACAAGAACGTAAAAAGCTCAATTCCTTCATGTGCAGCACCCATACAGCCTGTACTCTCTTGTTTCTCAGCCTCTAACAAGACCAAGAAGAAAAAGAATGCAAATATGATAATCACAGCACAAGGTGATTTACAAGAGCTGGATCCAGAATTGGTGGCCGAACCAGTTAACGCTCGATCGAAGTCCTTCGTCGGGACTCACGAGTACTTAGCGCCGGAGGTGATCTCAGGTTTAGGCCATGGGAGTGCTGTAGATTGGTGGACTTTTGGGGTGTTCTTGTATGAATTGTTGTATGGGAGGACACCCTTCAAAGGTGAAAACAATGAGAAGACACTCATAAACATCATTAAGCAGCCATTAAGTTTCCCAAGGATTGGTGTTTCTAATACTAAAGAAGTGGAAGAGTTGGTAAAGGTTCAAGACCTCATAAGTAAGCTCCTGATAAAGAACCCAAAGAAGAGAATTGGGAGTATAAAGGGTTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAAGGTGTGAATTGGGCTTTGATTAGATCAGTTAGGCCTCCTGAGGTCCCTAGAGATCTCCAAAAGATTAGGAGTACAGCTTCCTTACCAAAGTCATGCAAGAAAGAGAGAGGGGCTACATATCAAATTCCTCAGCATTTTGACTATTTTTAA 1419 0.4616 MATTTRDESDYDSSCSSITVPDSGHSWISDLSFGSRSSISVCSYNENSLYGGHKPHKANQAAWEAMKRLRGEKGRVGLDHFRLLRRVGSGDLGNVYLCQLRNPVVGLPECLYAMKVVDRESLAFRKKLQRAEMEKEILGMLDHPFLPTLYAEFDASHYSCLVMEFCPGGDLHAVRQRQQGKRFSISSAKFYASEILLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRPKMDPETMNKNVKSSIPSCAAPIQPVLSCFSASNKTKKKKNANMIITAQGDLQELDPELVAEPVNARSKSFVGTHEYLAPEVISGLGHGSAVDWWTFGVFLYELLYGRTPFKGENNEKTLINIIKQPLSFPRIGVSNTKEVEELVKVQDLISKLLIKNPKKRIGSIKGSVEIKRHEFFKGVNWALIRSVRPPEVPRDLQKIRSTASLPKSCKKERGATYQIPQHFDYF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00615 472 PANTHER FLIPPASE KINASE 1-RELATED 37 443 - -
Eupl10g00615 472 Pfam Protein kinase domain 82 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00615 472 Pfam Protein kinase domain 284 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00615 472 FunFam protein kinase PINOID 166 234 - -
Eupl10g00615 472 CDD STKc_phototropin_like 79 440 - -
Eupl10g00615 472 FunFam protein kinase PINOID 2 79 165 - -
Eupl10g00615 472 ProSiteProfiles Protein kinase domain profile. 81 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00615 472 SUPERFAMILY Protein kinase-like (PK-like) 67 448 IPR011009 -
Eupl10g00615 472 Gene3D Phosphorylase Kinase; domain 1 79 165 - -
Eupl10g00615 472 Gene3D Transferase(Phosphotransferase) domain 1 284 440 - -
Eupl10g00615 472 SMART serkin_6 81 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00615 472 FunFam serine/threonine-protein kinase D6PK-like 310 440 - -
Eupl10g00615 472 Gene3D Transferase(Phosphotransferase) domain 1 166 234 - -
Eupl10g00615 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00615 Eupl-Chr10 24296573 24299010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00615 7 472 AGC Kinase Gene Family AT2G26700 56.405 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl10g00615 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00615 K08286 - nnu:104592366 813.142