Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00603 ATGGCTGCTTCATCTTCTTCTGTGATTTTGGGGGGTTTATCATCTCCTCACTGTGCTCGTGGAAGAAATCACGGCGGTGAACCCCTCTTTGTGGGCAACCCCAGACCCTCTCTCGTTATGCCACGTGTCCCTATCACTCGCTCCGCTCTTGCTTTCTCTCGTCGCAGAAACACCAACTCCGCAATTACTTCGAAGAAGAAGAGATTACCTCAAAAGGATGATGCAGAGGAGGATGTTTTAGATGAAGATGCCATTGATGCACTCTTTAATCAGCTGGAAGAAGATCTTAAAAATGATCTATCCACTGATGACAATGATGATGAGATAAGTGAGGAAGACCTAGCTAGGCTTGAACAAGAGTTGGAGGAGGCACTGGGGGATGATGATGAGATATCAGTTATGTTCAATTCCAGTGCAGACAGTATAGAAAGTGATCATGATGCTGACGAAGACGAAGACAAAGATGAAGACGAAACACCATTGAAGCTTAAAAATTGGCAACTTCGACGATTGGCTTCTGCTTTAAAGATTGGTCGGCGTAAAACTAGTATTAAAAGTCTTGCTGCTGAACTTTGTCTAGATAGGGCTGTGGTCCTTGAATTGCTTCGTGACCCCCCTCCAAATCTTCTATTGATGTCTGCTGCTTTACCTGATAAAGTTGTGCCAACAACTTCGGAGCCTGAAACCAAACCCATGGAGCCTGCTTCTGTGGAAACTACAGTGGATGTTGATGAACCTGAGCCCAAGGTTAAAGTGCCTGTCCATGTCATGCAAAGCAGATGGTCTATGCAGAAGAGACTGAAGAAAGTGCATGTTGAAACCCTTGAAAGAGTTTATAATCGTACAAAGCGGCCTACTAATGCGATGATCAGCAGCATAGTGCACGTGACCAACCTGCCGCGAAAAAAAGTCGTGAAATGGTTCGAAGACAAGCGCTCTCAAGATGGGGTTCCTCAGCACCGTCTCCCCTTCCAGCGGTCCACTTCTGAGACCATCTTTACCAATTAA 1008 0.4563 MAASSSSVILGGLSSPHCARGRNHGGEPLFVGNPRPSLVMPRVPITRSALAFSRRRNTNSAITSKKKRLPQKDDAEEDVLDEDAIDALFNQLEEDLKNDLSTDDNDDEISEEDLARLEQELEEALGDDDEISVMFNSSADSIESDHDADEDEDKDEDETPLKLKNWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVLELLRDPPPNLLLMSAALPDKVVPTTSEPETKPMEPASVETTVDVDEPEPKVKVPVHVMQSRWSMQKRLKKVHVETLERVYNRTKRPTNAMISSIVHVTNLPRKKVVKWFEDKRSQDGVPQHRLPFQRSTSETIFTN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00603 335 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 49 329 - -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 221 244 - -
Eupl10g00603 335 Gene3D - 260 321 - -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 316 335 - -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 138 160 - -
Eupl10g00603 335 ProSiteProfiles 'Homeobox' domain profile. 258 318 IPR001356 GO:0003677
Eupl10g00603 335 SMART HOX_1 264 322 IPR001356 GO:0003677
Eupl10g00603 335 Coils Coil 107 127 - -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 56 78 - -
Eupl10g00603 335 CDD homeodomain 264 315 IPR001356 GO:0003677
Eupl10g00603 335 SUPERFAMILY Homeodomain-like 260 324 IPR009057 -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 320 335 - -
Eupl10g00603 335 MobiDBLite consensus disorder prediction 1 35 - -
Eupl10g00603 335 Pfam Homeodomain 266 314 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00603 Eupl-Chr10 24133286 24140208 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl10g00603 Homeodomain 9.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00603 - - vvi:100254226 375.555