Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00581 ATGGCTGCTTCATCTTCTTCTGTGATTTTGGGGGGTTTATCATCTCCTCACTGTGCTCGTGGAAGAAATCACGGCGGTGAACCCCTCTTTGTGGGCAACCCCAGACCCTCTCTCGTTATGCCACGTGTCCCTATCACTCGCTCCACTCTTGCTTTCTCTCGTCGCAGAAACACCAACTCCGCAATTACTTCGAAGAAGAAGAGATTACCTCAAAAGGATGATGCAGAGGAGGATGTTTTAGATGAAGATGCCATTGATGCACTCTTTAATCAGCTGGAAGAAGATCTTAAAAATGATCTATCCACTGATGACAATGATGATGAGATAAGTGAGGAAGACCTAGCTAGGCTTGAACAAGAGTTGGAGGAGGCACTGGGGGATGATGATGAGATATCAGTTGTGTTCAATTCCAGTGCAGACAGTATAGAAAGTGATCATGATGCTGACGAAGACGAAGACGAAGACGAAACACCATTGAAGATTAAAAATTGGCAACTTCGACGATTGGCTTCTGCTTTAAAGATTGGTCGGCGTAAAACTAGTATTAAAAGTCTTGCTGCTGAACTTTGTCTAGATAGGGCTGTGGTCCTTGAATTGCTTCGTGACCCCCCTCCAAATCTTCTATTGATGTCTGCTGCTTTACCTGATAAAGTTGTGCCAACAACTTCGGAGCCTGAAACCAAACCCATGGAGCCTGCTTCTGTGGAAACAACAGTGGATGTTGATGAACCTGAGCCCAAGGTTAAAGTGCCTGTCCATGTCATGCAAAGCAGATGGTCTATGCAGAAGAGACTGAAGAAAGTGCATGTTGAAACCCTTGAAAGAGTTTATAATCGTACAAAGCGGCCTACTAATGCGATGATCAGCAGCATAGTGCATGTGACCAACCTGCCGCGAAAAAAAGTCGTGAAATGGTTTGAAGACAAGCGCGCTCAAGATGGGGTTCCTCAACACCGTCTCCCCTTCCAGCGGTCCACTTCCGAGACCATCTTTACCAATTAA 1002 0.4561 MAASSSSVILGGLSSPHCARGRNHGGEPLFVGNPRPSLVMPRVPITRSTLAFSRRRNTNSAITSKKKRLPQKDDAEEDVLDEDAIDALFNQLEEDLKNDLSTDDNDDEISEEDLARLEQELEEALGDDDEISVVFNSSADSIESDHDADEDEDEDETPLKIKNWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVLELLRDPPPNLLLMSAALPDKVVPTTSEPETKPMEPASVETTVDVDEPEPKVKVPVHVMQSRWSMQKRLKKVHVETLERVYNRTKRPTNAMISSIVHVTNLPRKKVVKWFEDKRAQDGVPQHRLPFQRSTSETIFTN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00581 333 MobiDBLite consensus disorder prediction 219 242 - -
Eupl10g00581 333 Coils Coil 107 127 - -
Eupl10g00581 333 ProSiteProfiles 'Homeobox' domain profile. 256 316 IPR001356 GO:0003677
Eupl10g00581 333 SMART HOX_1 262 320 IPR001356 GO:0003677
Eupl10g00581 333 MobiDBLite consensus disorder prediction 54 78 - -
Eupl10g00581 333 MobiDBLite consensus disorder prediction 1 33 - -
Eupl10g00581 333 Gene3D - 258 319 - -
Eupl10g00581 333 Pfam Homeodomain 264 312 IPR001356 GO:0003677
Eupl10g00581 333 MobiDBLite consensus disorder prediction 139 159 - -
Eupl10g00581 333 CDD homeodomain 262 313 IPR001356 GO:0003677
Eupl10g00581 333 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 50 327 - -
Eupl10g00581 333 SUPERFAMILY Homeodomain-like 258 323 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00581 Eupl-Chr10 23851422 23858254 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl10g00581 Homeodomain 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00581 - - nnu:104592384 380.948