Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00548 ATGTTTATGCTTCTAATCCTCTCTACCTTTCTTAGCCAAGCTTCTTCAAGTACTGTTGATCCCATCAACTTCTCCTTTCCTTCTTTTGATCCTGAGTGTTGTGATGAGGGTGGTGAGCTCCTCTGTTTGGGCTCTGCTGCAGCTGGCAATGGGTATGTGGACGTCACCCCCAGGCACCAACAAACCAATGACACCACGTCTTCATCGCTGGAAAACAACGTTGGGCGGATTCTATACAAGTACCCTGTGCTTGCATGGCCAGCAATTATCTCTACCACCTTCACTGTTAGGATATCCAAGGACCCCAATTCAGTGGGTTTCGGTGATGGAATGGCATTTGTTATGGCACAGGATAACGGTCCTTCTCCTCCCAACAGCCATGGCGCGTTTCTGGGTCTCCTCAATCGGACCACTGAAGGTGGCATCATCCGTCAACTAGCTGTGGAGCTAGACACTTACTACAATAATGAGTTCGACCCTGATGACAACCATGTCGGGATTGACACCACGAGCATAAAATCCATTGCCACCGTGAACCTCAACAGCATCGGGGTCGACCTGAAACTCGGAAGAGAGGTGAAGGTTAAGATAGATTATGATGGCTGGGAAAAGAAACTTCGAATCTCTGTGGCATATGCTGGGGGCTTCCTGGTGAGTGTTCTCAATTATTCGGTCATCATGTCAAAAATAGTGCCGAGCTCCGTTTACGTGGGATTCACAGGCTCAACAGGAATTGTCTCAGAGACCCACCAGATCCTTAATTGGGTTTTCACATCAGTCCCATTGCCTAAGTACTCACTTAATGATGGTCCTCACAGCAATGATAAGACTAAAAAAATTCTCATCATCATGTTCCCAATCATCACTGGTGGTTTGGTTTTGGCAATGTGCATTTATCTGGTGGTAAAAGTGTGCCGGCGAAAAAATGTGAAGTACTTGAAGGGGGAAGATATAGAGAGCCGATCCAGGACTGCTGCCAATGCTCCCAAGATGTTTACTTTGAAGCAGCTCTCAAAGGTTACAGACAACTTCAGCAAAGAAAATCTGTTAGGGACAGGAGGATTTGGGAGTGTTTACCGAGGCCTCATATCGGATCCTCCCTCAACTATAGCCGTCAAAAAGATATCGGCAACTTCAAAACAAGAGTGTGGCAACACTGTTGTCCATCGGGATGTAAAGCCGAACAATGTGATGCTGGATTCCGACTACAACGCTCGTCTAGGTGACTTTGGGCTAGCCAGGTTACTCCAAAATGAATCTGCAGTGACAACAATGCTCGCCGGGACTCCTGGGTATCTAGCACCTGAATGTACCTATACTGGGAAGGCTACACCGGAGTCGGACGTCTTTAGCTTTGGAATTGTGGTACTTGAAGTTGTATGTGGGAGGAGATGTATAGGTGGTATAGAAGAGAAAAATTTGGTGGATTATGTATGGAGCCTACATGGGAAAGGTGAGTTGCTCCAGTGTGTGGATCAAAAGCTTGAGGTTAACTTTGAAGAGGAAGAAGTGAAGCGAGCTTTGGCTGTTGGGTTGGCTTGTTCACATCCAGACCCCATGTTCCGGCCTACAATGCGCAAGGTGGTTCAAGTGTTCATGAACCCAAATGAGCCTTTAATGGATTTACCCGAGTCTCGACCCAATGCCATTTATATAACTATGAATTCTTGTTCTCCTTCAACCACAAATGGTCTAGGCTCGAGTGTTGCCTCTGGCTCATGCCCGTCCACGACATTGCTCGATGAGACAGCCGTTCAGTATGGCAGGTGA 1770 0.4706 MFMLLILSTFLSQASSSTVDPINFSFPSFDPECCDEGGELLCLGSAAAGNGYVDVTPRHQQTNDTTSSSLENNVGRILYKYPVLAWPAIISTTFTVRISKDPNSVGFGDGMAFVMAQDNGPSPPNSHGAFLGLLNRTTEGGIIRQLAVELDTYYNNEFDPDDNHVGIDTTSIKSIATVNLNSIGVDLKLGREVKVKIDYDGWEKKLRISVAYAGGFLVSVLNYSVIMSKIVPSSVYVGFTGSTGIVSETHQILNWVFTSVPLPKYSLNDGPHSNDKTKKILIIMFPIITGGLVLAMCIYLVVKVCRRKNVKYLKGEDIESRSRTAANAPKMFTLKQLSKVTDNFSKENLLGTGGFGSVYRGLISDPPSTIAVKKISATSKQECGNTVVHRDVKPNNVMLDSDYNARLGDFGLARLLQNESAVTTMLAGTPGYLAPECTYTGKATPESDVFSFGIVVLEVVCGRRCIGGIEEKNLVDYVWSLHGKGELLQCVDQKLEVNFEEEEVKRALAVGLACSHPDPMFRPTMRKVVQVFMNPNEPLMDLPESRPNAIYITMNSCSPSTTNGLGSSVASGSCPSTTLLDETAVQYGR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00548 589 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
Eupl10g00548 589 Gene3D Transferase(Phosphotransferase) domain 1 389 544 - -
Eupl10g00548 589 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 259 IPR013320 -
Eupl10g00548 589 Gene3D Phosphorylase Kinase; domain 1 315 388 - -
Eupl10g00548 589 SUPERFAMILY Protein kinase-like (PK-like) 329 547 IPR011009 -
Eupl10g00548 589 Gene3D - 19 269 - -
Eupl10g00548 589 PANTHER - 381 534 - -
Eupl10g00548 589 ProSiteProfiles Protein kinase domain profile. 232 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00548 589 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Eupl10g00548 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Eupl10g00548 589 Pfam Protein kinase domain 385 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00548 589 CDD lectin_legume_LecRK_Arcelin_ConA 22 259 IPR001220 GO:0030246
Eupl10g00548 589 SMART serkin_6 344 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00548 589 FunFam Lectin-domain containing receptor kinase A4.3 377 553 - -
Eupl10g00548 589 Pfam Legume lectin domain 23 260 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00548 Eupl-Chr10 23423254 23426666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00548 370 547 Receptor kinase-like Gene Family AT5G55830 50.811 3.77e-51 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl10g00548 Lectin_legB 6.6e-46 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00548 - - fve:101298683 562.762