Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00537 ATGAGTCGAGTGCTGGATAATTTAGCCCTCAAGCGAAAACGAACCGATTTGAAGTTACCCTCTCAAACTCTCTCCGATGCTGAGAGTGTGCTCTATGAACTGATCCAAAGCAAGAAAGACATGGGAATTTGGACAAGGGATATGAAATTTGAAACAAAGCTACAAGACAATGTGGTTACCAAGTCCCTCAAGTCACTCCAAGCCAAGAAACTGATAAAGGAAGTTGTTAACATAAAAAACAAAGGGAGAAAGATTTACATGGCAGTAGAGTTTGAACCTGCCAAGGAACTCACAGGTGGATCATGGTATACAGATGGGAAGCTCGACACAGAATTCATAACGATTCTGAGAGAGCAATGCTTGAGTCACATCTTCAAGCGGAAGGTTGCCACGATCGAGGATATCTCAGAATTGATCAATAATTTGAACCTCGTTATGGGTGGGTGCACTACTGAGCAAATTGCAGAAATTGTGCAGGCTTTGGTATTGGACAATGAAGTTGTGCAGGTAAGGAGTACTGAGACAGGGGAGTTTGCGACTATTCCAATGGGGACACTGTGTTACAGATATACCTTTGGGGATCAATTTATCATTGAATTTGATGAAGGGAAAGTAGCGGAAAGCCAAAGAAGATGGGAATTTTCAGCGATTGAAAAGCCTTTAGGAGGTGCCCTTAGCCATGCCTTTGTTGCCAATAAAGCAACAAAAGCGTGGAAAGTAGCAGGTATCCCAGCTCAAGGCCAAGGAAGCTTGAAAACAGGCTTTTATTCTTCTACTTGCCCGAGAGCTGAAGCAATAGTTAGGTCTACTGTTGAAACACACTTTAATAAGGATCCCACCATTGCTGCTGGCTTGTTAAGGTTACACTTCCATGACTGTTTTGTTCAGGGTTGCGATGGATCGGTTTTGATTACCGGGTCTTCCGCAGAGAGGAATGCATTGCCAAATCTTGGGTTAAGAGGCTTTGAAGTGATCGATGATGCAAAAACACAATTGGAGGCCTTGTGCCCTGGAGTAGTCTCTTGTGCTGACATACTGGCATTAACCGCTCGTGACGCCGTCGACCTGAGCAAGGGACCAAGCTGGTTGGTACCGACGGGAAGAAGAGATGGTAGGATCTCATCATCATCTGAAGCCTCAAATTTACCATCTCCTGCTGACTCTGTCACCATTCAGAGGCAAAAATTTGCAGCTAAAGGCTTAGATGATCATGATCTTGTGACACTAGTTGGTATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTATATGTATGTGTGTACAATATTTTATGTCACATTTGTTTGTAGGGGCACATACAATTGGGCAAACGGATTGTTTGTTTTTCCGTTACCGCTTGTACAACTTCACGGCAACTGGCAATGCGGATCCAACTATAAACCAAGCATTTCTTGCACAACTCCAAGCTCTTTGTCCCTTAACGGGGACGGCTCGAAGCGCGTCGCACTAGACAAGGACAGCCAGACCAATTTCGACGTTAGTTACTTCAAGAATGTGAGAGATGGTAATGGAGTTCTTGAATCAGACCAGAGGCTATTGGGCGACGCTACTACACGTAGCATCGTACAAAACTACGCAGGCAACGTCAGAGGTTTGCTAGGTTTGAGATTCGATCTCGAGTTCCAGAAAGCCATGATCAAGATGAGTAGCATTGAGGTGAAGACAGGGTCGCAAGGAGAGATCAGAAAGATATGTTCCAAATTCAATTGA 1740 0.4443 MSRVLDNLALKRKRTDLKLPSQTLSDAESVLYELIQSKKDMGIWTRDMKFETKLQDNVVTKSLKSLQAKKLIKEVVNIKNKGRKIYMAVEFEPAKELTGGSWYTDGKLDTEFITILREQCLSHIFKRKVATIEDISELINNLNLVMGGCTTEQIAEIVQALVLDNEVVQVRSTETGEFATIPMGTLCYRYTFGDQFIIEFDEGKVAESQRRWEFSAIEKPLGGALSHAFVANKATKAWKVAGIPAQGQGSLKTGFYSSTCPRAEAIVRSTVETHFNKDPTIAAGLLRLHFHDCFVQGCDGSVLITGSSAERNALPNLGLRGFEVIDDAKTQLEALCPGVVSCADILALTARDAVDLSKGPSWLVPTGRRDGRISSSSEASNLPSPADSVTIQRQKFAAKGLDDHDLVTLVGILSLSLSLSLSLSLYMYVCTIFYVTFVCRGTYNWANGLFVFPLPLVQLHGNWQCGSNYKPSISCTTPSSLSLNGDGSKRVALDKDSQTNFDVSYFKNVRDGNGVLESDQRLLGDATTRSIVQNYAGNVRGLLGLRFDLEFQKAMIKMSSIEVKTGSQGEIRKICSKFN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00537 579 SUPERFAMILY "Winged helix" DNA-binding domain 22 90 IPR036390 -
Eupl10g00537 579 SUPERFAMILY Heme-dependent peroxidases 251 579 IPR010255 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 MobiDBLite consensus disorder prediction 367 386 - -
Eupl10g00537 579 PANTHER PEROXIDASE 25-RELATED 253 567 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 Gene3D - 26 89 IPR036388 -
Eupl10g00537 579 Gene3D - 559 579 - -
Eupl10g00537 579 Pfam RNA polymerase Rpc34 subunit 21 129 IPR007832 GO:0005666|GO:0006383
Eupl10g00537 579 ProSiteProfiles Plant heme peroxidase family profile. 250 579 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 Gene3D - 255 382 - -
Eupl10g00537 579 Gene3D Peroxidase, domain 2 383 416 - -
Eupl10g00537 579 CDD secretory_peroxidase 251 578 IPR033905 GO:0004601|GO:0042744
Eupl10g00537 579 PRINTS Plant peroxidase signature 404 416 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 492 507 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 553 566 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 284 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 339 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 358 373 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 508 525 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 260 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 FunFam DNA-directed RNA polymerase III subunit RPC6 25 90 - -
Eupl10g00537 579 Pfam Peroxidase 267 537 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Haem peroxidase superfamily signature 340 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Haem peroxidase superfamily signature 282 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Haem peroxidase superfamily signature 358 370 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 PRINTS Haem peroxidase superfamily signature 494 509 IPR002016 GO:0004601|GO:0006979|GO:0020037
Eupl10g00537 579 ProSitePatterns Peroxidases active site signature. 282 293 IPR019794 GO:0004601
Eupl10g00537 579 FunFam Peroxidase 254 394 - -
Eupl10g00537 579 Gene3D Peroxidase, domain 2 486 558 - -
Eupl10g00537 579 MobiDBLite consensus disorder prediction 370 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00537 Eupl-Chr10 23235965 23245258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00537 251 579 Peroxidase AT2G41480 59.760 3.21e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00537 K00430 - nnu:104592432 453.751