Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00528 ATGGCGATGATTCTGCTCCACGGAACTCTTCACGCGACGATCTTGGAAGCAAAATCGTTAACGCATCCTGACAGAGCTACCGGAGGTGCCCCTAAGTTCATTCGGAAGACTGTTGGTACACAAACGGTATCAAAGAGAAGATTGTTTTCCAGGATCAAGAGAGTGTTGTTATGCCGCCCTCAGCTTGTGGAAAACATTGAGGAGACAGTTGGTATTGGCAAAGGAGCTACCAAACTCTATGCGACAATCGATCTAGAAAAAGCTAGAGTTGGTCGAACCAGACTGATTGAAAATGAACCTGTCAATCCCCGGTGGTACGAGTCTTTCCACATCTACTGTGCTCATATGGCTTCTAATGTTATCTTCACGGTTAAAGACGATAATCCTGTAGGGGCAACCCTAATTGGGAGAGCTTATATGCCTGTTGTGGAAATCCTATATGGGGGACAAGTGGATAGATGGCTTGAGATCTTGGATGTAAACCATAAACCTGTACATGGAGGTGCTAAGATCCGTGTGAAGCTACAATTTTTTAATGTTACTCAAGACCAAAGTTGGTCTAGTGGAATTAGAAGTCCTAAATTTCCCGGTGTCCCTTACACATTCTTCACACAGAGACAAGGATGTAGAGTTTCTCTGTACCAAGATGCACACGTCCCAGACAACTTCGTCCCAAAATTCCCTCTTTCGGGAGGCAAGTATTACGAACCCCGTAGATGCTGGGAGGATATTTTTGATGCGATCACTAATGCAAGGCACTTGATTTACATAACGGGGTGGTCTGTATATACTGAGATCACCTTGGTGAGGGACTCAAGGAGGCAAAAGCCAGGAGGAGGCATTACACTTGGGGAGCTGCTCAAGAAGAAGGCAAATGAAGGTGTCAGGGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTGGGTTTACTGAAGAAGGACGGATTGATGGCCACCCATGATCAAGAAACTGCAAATTACTTCCAGAACACTGGTGTGCACTGTGTCTTGTGCCCCCGTAATCCCGATGATGGGAGGAGCATAGTTCAGGACTTAGAGATATCTACCATGTTCACTCATCACCAGAAGATTGTGGTGGTGGACAGTGAGATGCCTACCAGAGTTTCACAACAGAGGAGGATTCTGAGTTTTGTTGGGGGTATTGATCTCTGTGACGGGCGATATGATACACAGTTCCATTCCCTTTTTAGGACCTTGGACACAGCCCACCATGATGATTTTCATCAGCCCAACTTCACTGGTGCTTCAATCACTAAGGGTGGCCCAAGGGAGCCTTGGCATGACATTCACTGCAAGCTAGAAGGACCTATTGCTTGGGATGTCTTGTACAACTTCGAGCAGAGGTGGAGGAAGCAAGGTGGGAAGGACCTACTTGTTCAGCTCAGAGACCTTGCTAACATCATTATCCCCCCCTCTTCAGTGATGTTGCCAGAAGACCGTGAAACATGGAACGTTCAATTATTCAGATCAATTGATGGAGGGGCAGCTTTTGGCTTCCCGGACACACCCGAGGATGCTGCCAGAGCTGGGCTGGTTAGTGGGAAGGATAACATCATCGATCGAAGCATTCAGGATGCTTACATAAATGCCATTCGACGAGCAAAGAATTTCATTTACATTGAAAATCAGTATTTCCTTGGAAGCTCATTCTGTTGGAAAGCAGATAACATCAAAGTCGAGGATATCGGTGCTTTGCATCTTATTCCAAAGGAACTCTCACTAAAGATTGTTAGTAAGATTGAAGCAGGGGAGAGGTTTACTGTATATGTTGTGGTGCCAATGTGGCCAGAGGGGATCCCGGAGAGTGCATCGGTTCAGGCAATATTAGATTGGCAGAAAAGGACGATGGAGATGATGTACACCGATATCATTCAGGCCCTCAGGGCTAAGGGGCTTCAAGCAAACCCCAAGGACTACTTGACTTTCTTCTGCCTTGGCAATCGGGAATTGAATATGAGCGGAGAGTATACACCCTCAGAGAAACCAGAACCTAACACTGATTATAGTAGAGCTCAGCAGTCTCGGCGTTTCATGATCTACGTTCATGCCAAGATGATGATAGTTGACGATGAATACATAATCATTGGATCTGCCAACATCAACCAGAGGTCCATGGACGGTGCCAGGGACTCCGAGATTGCCATGGGGGCTTACCAACCATATCAACTAGCAACCAGGCAACCAGCCAGGGGCCAGATCCATGGCTTCCGGTTAGCATTGTGGTATGAGCATCTCGGAATGGTTGACGACTCCTTCCTCGAGCCTGAGGGTGTGGAATGTATCAGAAAGGTGAACCAGATTGCCGACAAATACTGGGAACTCTACTCGAGCGAGACGCTGGATCATGACATGCCAGGCCATCTGCTCACCTACCCCGTCAGCATTACTTCCGATGGAGCGATCACGGAGCTGCCAGGGACTGAGTTCTTCCCAGACACCAAGGCTCGTGTCCTAGGTGCCAGATCTGATTATCTTCCTCCCATTCTCACTACCTAA 2517 0.4732 MAMILLHGTLHATILEAKSLTHPDRATGGAPKFIRKTVGTQTVSKRRLFSRIKRVLLCRPQLVENIEETVGIGKGATKLYATIDLEKARVGRTRLIENEPVNPRWYESFHIYCAHMASNVIFTVKDDNPVGATLIGRAYMPVVEILYGGQVDRWLEILDVNHKPVHGGAKIRVKLQFFNVTQDQSWSSGIRSPKFPGVPYTFFTQRQGCRVSLYQDAHVPDNFVPKFPLSGGKYYEPRRCWEDIFDAITNARHLIYITGWSVYTEITLVRDSRRQKPGGGITLGELLKKKANEGVRVLMLVWDDRTSVGLLKKDGLMATHDQETANYFQNTGVHCVLCPRNPDDGRSIVQDLEISTMFTHHQKIVVVDSEMPTRVSQQRRILSFVGGIDLCDGRYDTQFHSLFRTLDTAHHDDFHQPNFTGASITKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWRKQGGKDLLVQLRDLANIIIPPSSVMLPEDRETWNVQLFRSIDGGAAFGFPDTPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFCWKADNIKVEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQKRTMEMMYTDIIQALRAKGLQANPKDYLTFFCLGNRELNMSGEYTPSEKPEPNTDYSRAQQSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYQLATRQPARGQIHGFRLALWYEHLGMVDDSFLEPEGVECIRKVNQIADKYWELYSSETLDHDMPGHLLTYPVSITSDGAITELPGTEFFPDTKARVLGARSDYLPPILTT* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00528 838 SMART pld_4 356 394 IPR001736 GO:0003824
Eupl10g00528 838 SMART pld_4 684 711 IPR001736 GO:0003824
Eupl10g00528 838 FunFam Phospholipase D delta 231 474 - -
Eupl10g00528 838 Pfam C2 domain 9 156 IPR000008 -
Eupl10g00528 838 CDD C2_plant_PLD 2 178 - -
Eupl10g00528 838 PIRSF PLD_plant 1 838 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Eupl10g00528 838 Gene3D C2 domain 6 188 IPR035892 -
Eupl10g00528 838 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 684 711 IPR001736 GO:0003824
Eupl10g00528 838 FunFam Phospholipase D 497 730 - -
Eupl10g00528 838 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 180 IPR035892 -
Eupl10g00528 838 ProSiteProfiles C2 domain profile. 1 155 IPR000008 -
Eupl10g00528 838 Gene3D Endonuclease Chain A 230 473 - -
Eupl10g00528 838 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 394 IPR001736 GO:0003824
Eupl10g00528 838 SUPERFAMILY Phospholipase D/nuclease 182 476 - -
Eupl10g00528 838 Pfam Phospholipase D Active site motif 356 394 IPR001736 GO:0003824
Eupl10g00528 838 Pfam Phospholipase D Active site motif 685 711 IPR001736 GO:0003824
Eupl10g00528 838 SUPERFAMILY Phospholipase D/nuclease 510 767 - -
Eupl10g00528 838 Gene3D Endonuclease Chain A 511 732 - -
Eupl10g00528 838 PANTHER PHOSPHOLIPASE D 3 826 IPR015679 -
Eupl10g00528 838 SMART C2_3c 9 154 IPR000008 -
Eupl10g00528 838 Pfam Phospholipase D C terminal 756 827 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00528 Eupl-Chr10 23091180 23095367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00528 1 838 Phospholipase D Gene Family (Wang group) AT3G15730 74.136 0.0 1337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00528 K01115 - psom:113341011 1452.57