Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00517 ATGTCGAGCTGCATCGATGTCCCTTCTGAGCAAGTCTGCTACATCCCTTGCAAGTTTTGCAATATCATTCTTGCGGTTAGCGTTCCATGCAGCAGCTTGTTCGACATTGTAACCGTACGATGCGGGCATTGCACCAATCTATGGTCCGTGAACATGGCAGCGGCGTTGCAGTCGCTGTCGTGGCAAGATCTCCAGGCACCAAACTTCGCTTCTCCGGATTACAGAAACGACTTGGGCTCCTCTTCCAAATGCAACAAGATTTCAATGCGACCATCTCCTGCTAATAATGAGGAAAGGATCGTAAATCGGCCTCCTGAGAAGAGGCAGCGGGTGCCTTCTGCATATAATCAGTTCATTAAAGAGGAGATTCAGAGGATCAAGGCCAATAATCCCGATATCAGCCACAGGGAAGCATTCAGCACTGCAGCCAAAAATTGGGCACACTTTCCCCATATTCATTTCGGGTTGATGTTGGAGAACAACAATCAAGCTAAATTGGACGAGGGATCTGAGAAGCATATAATGACAAAGGCTGCGTTATTAAAGAAATGA 552 0.471 MSSCIDVPSEQVCYIPCKFCNIILAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSWQDLQAPNFASPDYRNDLGSSSKCNKISMRPSPANNEERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLENNNQAKLDEGSEKHIMTKAALLKK* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00517 183 CDD HMG-box_SF 110 146 - -
Eupl10g00517 183 PANTHER PROTEIN YABBY 6-RELATED 1 166 IPR006780 GO:0007275
Eupl10g00517 183 FunFam Axial regulator YABBY 101 171 - -
Eupl10g00517 183 Pfam YABBY protein 8 156 IPR006780 GO:0007275
Eupl10g00517 183 SUPERFAMILY HMG-box 91 149 IPR036910 -
Eupl10g00517 183 Gene3D High mobility group box domain 94 173 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00517 Eupl-Chr10 22802012 22806501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00517 9 166 C2C2-YABBY Transcription Factor Family AT2G26580 80.000 6.52e-89 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Eupl10g00517 YABBY 2.4e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00517 K25796 - nnu:104595406 346.28