Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00495 ATGGAGAGAGAAGGAACCCATCAAGAGCTTAAGAAAGGTCCATGGAAACCAGAAGAAGACTTGCTTCTGAAAAGATACATAGAGACCCATGGAGAGGGGAAGTGGGCAACTGTTTCCAAGAGATCAGGCTTGATGAGGGGAGGAAAGAGCTGCAGGCTGAGATGGAAGAATTATCTGAGACCAAATCTCAAACGCGGCGAGATATCGCAGGAGGAGGAGGACCTCATCATCCGAATGCATAAGCTTCTCGGCAATCGGTGGTCATTGATTGCCGGCCGGCTCCCTGGTCGAACGGACAATGAAGTAAAGAATTATTGGAACACCCATCTGACTAAAAGGAACCATCAAGGCAAAACAGTAGGATCAAACTCGAAGAGGAGAAAACACTCGCATTTACCTGATGCTCAACCATCTTGCGGTGATAGTCCTCACAACACCATTAATGGATCAGATGAAGGGAGTGATGTGCAGACTGTGCCTAGCCCTTGCATGGATGACACCAACAGTTACCACTACAACGTACAAACTCGGTGGTTGCCAACCGATGGGACATTCTACGAGGAACCTTTCTTGCCATCCCTAGATTCCATCTTTTTGCTCGAAGAATTTGAACAAAGAGATAATAAGTCTGGGATCGAGTCTCTGATTTACTTACCAGATGACATGTACCCAGTCCTGATATAG 684 0.4664 MEREGTHQELKKGPWKPEEDLLLKRYIETHGEGKWATVSKRSGLMRGGKSCRLRWKNYLRPNLKRGEISQEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLTKRNHQGKTVGSNSKRRKHSHLPDAQPSCGDSPHNTINGSDEGSDVQTVPSPCMDDTNSYHYNVQTRWLPTDGTFYEEPFLPSLDSIFLLEEFEQRDNKSGIESLIYLPDDMYPVLI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00495 227 SUPERFAMILY Homeodomain-like 9 106 IPR009057 -
Eupl10g00495 227 CDD SANT 69 110 IPR001005 -
Eupl10g00495 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Eupl10g00495 227 MobiDBLite consensus disorder prediction 110 158 - -
Eupl10g00495 227 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 141 - -
Eupl10g00495 227 Pfam Myb-like DNA-binding domain 65 110 IPR001005 -
Eupl10g00495 227 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Eupl10g00495 227 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Eupl10g00495 227 Gene3D - 4 65 - -
Eupl10g00495 227 Gene3D - 67 135 - -
Eupl10g00495 227 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Eupl10g00495 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 114 IPR017930 -
Eupl10g00495 227 CDD SANT 14 59 IPR001005 -
Eupl10g00495 227 MobiDBLite consensus disorder prediction 139 158 - -
Eupl10g00495 227 FunFam MYB-related transcription factor 11 64 - -
Eupl10g00495 227 SMART sant 11 61 IPR001005 -
Eupl10g00495 227 SMART sant 64 112 IPR001005 -
Eupl10g00495 227 FunFam Transcription factor TT2 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00495 Eupl-Chr10 22342043 22343561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00495 2 176 MYB Transcription Factor Family AT5G52600 55.682 1.02e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl10g00495 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00495 K09422 - nnu:104592480 289.656