Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00493 ATGGCTTTCTGTGCAAGGTTTTGTTGCGGGATGGGTTCGAATCGGAAAGAACAGAATAAGGGGAAGACGTGGAGGATTTTTTCTTTGAAGGAATTACTTGCTGCTACGAACAATTTTAATTACGACAACAAACTCGGAGAAGGGGGATTCGGTAGCGTTTATTGGGGGCAACTATGGGACGGATCTCAAATTGCTGTCAAAAGGCTAAAGGCCTGGAGCAACAAAGCCGAAATGCAATTTGCTGTCGAGGTCGAGATATTGGGCAGAGTCAAGCACAAGAATCTGCTGAGTTTACGTGGTTACTGTGCCGAAGGGCAAGAACGCCTTATAGTGTACGCCTACATGCCTAACTTGAGCTTATTCTCCCATCTTCATGGGCAGCACTCGGCAGAATGCCTTCTGAACTGGGAAAGGCGGATGAATATTGCAATTGAATCAGCAGAGGGCATTGCCTATCTTCACCACAATGCAACACCACATATAATTCACAGAGACATCAAGGCAAGTAATGTGTTGCTAGATTCAGATTTCCAGGCTCAAGTTGCTGATTTTGGATTCGCAAAGCTCATCCCTGATGGAGAGACTCATGTTACTACTAGGGTGAAAGGCACCCTCGGCTACCTCGCACCTGAATACGCCATGTACGGGAAGGCCTCAGAGAGCTGTGATGTCTACAGCTTTGGCATACTCTTGCTAGAGCTTGCTAGTGGCAAGAAACCCATAGAGAAACTCAGTGCAAAAACGAAGCGCGCAATCACTGATTGGGCCCTGCCATTGGTCCGTGAGAGGAAGTTTGATGAAGTGGCAGACGTGAAGCTTAATGGGAAGTTTGTTGAGGAAGAGCTGAAGAGGGTTGTCCTTGTCTCACTTACTTGCACTCAAAGTCAGCCTGAGAAGAGACCCACCATGCTCGAGGTGGTGGACCTGCTGAAGGGAGATTCGAAAGAGAAGCTATCTGATCTGGAGAATGATGAAATGTTCAGGGAAAATCCAGCTACAGAATATCCAGATCGATTATCAGGTCCAGAAGACAGCTCGGAGTTGATCTCGGAGGAGAAGGATTCGAAACAGGAGTCAAAAGAAGTCGTTGAGTCCACAGTAGTGGGAGTGCATAGCAGCTGA 1122 0.4733 MAFCARFCCGMGSNRKEQNKGKTWRIFSLKELLAATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKAEMQFAVEVEILGRVKHKNLLSLRGYCAEGQERLIVYAYMPNLSLFSHLHGQHSAECLLNWERRMNIAIESAEGIAYLHHNATPHIIHRDIKASNVLLDSDFQAQVADFGFAKLIPDGETHVTTRVKGTLGYLAPEYAMYGKASESCDVYSFGILLLELASGKKPIEKLSAKTKRAITDWALPLVRERKFDEVADVKLNGKFVEEELKRVVLVSLTCTQSQPEKRPTMLEVVDLLKGDSKEKLSDLENDEMFRENPATEYPDRLSGPEDSSELISEEKDSKQESKEVVESTVVGVHSS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00493 373 Gene3D Phosphorylase Kinase; domain 1 10 114 - -
Eupl10g00493 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 11 114 - -
Eupl10g00493 373 MobiDBLite consensus disorder prediction 320 373 - -
Eupl10g00493 373 Gene3D Transferase(Phosphotransferase) domain 1 115 328 - -
Eupl10g00493 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 363 - -
Eupl10g00493 373 SMART serkin_6 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00493 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Eupl10g00493 373 MobiDBLite consensus disorder prediction 340 361 - -
Eupl10g00493 373 SUPERFAMILY Protein kinase-like (PK-like) 21 310 IPR011009 -
Eupl10g00493 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 115 326 - -
Eupl10g00493 373 Pfam Protein kinase domain 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00493 373 ProSiteProfiles Protein kinase domain profile. 39 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00493 373 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00493 Eupl-Chr10 22285744 22292818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00493 27 365 Receptor kinase-like Gene Family AT1G60800 45.455 3.75e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Eupl10g00493 Pkinase 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00493 - - msin:131228029 591.267