Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00484 ATGGAGAAGAAGTGTGGGTGCTGGGCAGCTTTCAGGCGCAGCGTTAAGGGAACTTGCAAGTCCTCTGCTTCGAGAGACCCTGCTAACGCTCTCCCTCGAACCAGCCTTGTCTACGACGCAGCAACCGAGACTCGATACCTGAATGCTAGCAACCGGGACCTCTCTGCACCTCACGAAGCTCAGCTCTCCTCTGAAACCCCTGATCCACCACAGACTGAAAAGAAAGGCTTTCGCCAATTGCTTGAGTTTACTTTTCAGGAACTCAAGTCTGCAACTGGAAACTTCAGGCCTGATAGTATTCTTGGGGAAGGTGGGTTTGGATTTGTTTTCAAAGGATGGATTGAGGAGAACGGCACTGCTCCTGCAAAACCTGGCTCAGGTGTCACAGTTGCGGTCAAAAGTCTGAAGCCAGATGGTCTTCAGGGTCACAGAGAATGGGTGGCTGAGGTCGACTTCCTTGGACAGCTTCATCACCCTAACCTCGTTAAACTTATTGGGTACTGCATTGAAGATGATCAGCGGCTGCTCGTCTACGAATTTATGACCCGAGGAAGTCTTGAAAACCATCTTTTCAGAAGGTCCCTACCTCTTCCATGGTCCAACAGGATTAAGATTGCACTTGGTGCAGCTAAAGGATTGGCCTTTCTCCATGGAGGTTCTGAGCCCATCATCTATAGAGACTTTAAGACGTCCAACATTTTGCTTGATTTAGAATATATTGCGAAGCTTTCGGATTTTGGTCTGGCTAAAGCTGGGCCCCAGGGGGATAAGACACATGTATCTACTAGGGTCGTTGGAACGTATGGTTATGCTGCACCAGAGTATGTGATGACAGGCCACTTGACGTCTAAGAGTGATGTCTACAGTTTTGGTGTTGTATTACTTGAAATTTTAACGGGTCGAAGATCAATGGACAAGAACCGACCTAGTGGGGAGCAAAACCTCGTCGCCTGGGCAAGGCCGTATTTAGGAGACAAGCGAAAGCTTTATCAGCTAGTGGATCCTCGTTTGGAACTCAACTACTCCATTAAAGGGGTGCAGAAAGTCGCTCAGATGGCTTACTACTGCCTCAGCAGGGACCCAAAATCTCGTCCTTCGATGGATGAAATCGTGAAGGGTCTCACCCCATTGCAAGATCTCAACGACCTCGCTATCTTGTCATATCACTCCCGTTCATCTCAACAAGCTCGGCGCAAGAAGAAATCTGATGGAACCCGGCAGCTCACTTATTCCCAATCCAAAACCATCAGGAACTCTCCATTGAATACTGGGGAAAAAGTTTCAGAGATTGCCCCAAGATGCGCTGTATGA 1311 0.4844 MEKKCGCWAAFRRSVKGTCKSSASRDPANALPRTSLVYDAATETRYLNASNRDLSAPHEAQLSSETPDPPQTEKKGFRQLLEFTFQELKSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRSLPLPWSNRIKIALGAAKGLAFLHGGSEPIIYRDFKTSNILLDLEYIAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKNRPSGEQNLVAWARPYLGDKRKLYQLVDPRLELNYSIKGVQKVAQMAYYCLSRDPKSRPSMDEIVKGLTPLQDLNDLAILSYHSRSSQQARRKKKSDGTRQLTYSQSKTIRNSPLNTGEKVSEIAPRCAV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00484 436 CDD STKc_IRAK 101 377 - -
Eupl10g00484 436 Gene3D Phosphorylase Kinase; domain 1 70 180 - -
Eupl10g00484 436 PANTHER OS01G0588500 PROTEIN-RELATED 73 378 - -
Eupl10g00484 436 FunFam Serine/threonine-protein kinase BIK1 62 180 - -
Eupl10g00484 436 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Eupl10g00484 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Eupl10g00484 436 FunFam Probable serine/threonine-protein kinase PBL8 181 395 - -
Eupl10g00484 436 Pfam Protein tyrosine and serine/threonine kinase 99 373 IPR001245 GO:0004672|GO:0006468
Eupl10g00484 436 MobiDBLite consensus disorder prediction 391 427 - -
Eupl10g00484 436 Gene3D Transferase(Phosphotransferase) domain 1 181 399 - -
Eupl10g00484 436 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00484 436 MobiDBLite consensus disorder prediction 406 425 - -
Eupl10g00484 436 SUPERFAMILY Protein kinase-like (PK-like) 79 377 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00484 Eupl-Chr10 22135998 22147509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00484 83 374 Glycoside Hydrolase AT3G07070 54.392 2.28e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl10g00484 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00484 - - nnu:104592488 788.489