Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00481 ATGGCGCTCTCAATCTCTTTCGTTCCCTCTTCTCTAAGTTTCAGTTCAGAGCAGCAGCGTCCCCAACTACCCTTTTCATCCATCAATGGCAGAAACACTCTCTGGACCCACCGCCAACCCTCCCTCTCTTTCTCTTCTATTAAGACGAGGAAGAAGAGGCTCTCCTCCTCCTCCTCCGCTAACCACCGCTTCGGTGCCACTGTCGTCAGAGCCGCTGCCGACTACTACTCCACCCTCGGGGTTCCCAAGTCTGCTAACATCAAAGAAATCAAAGCTGCCTACCGAAAGTTGGCACGCCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACTGAAAAGTTCAAGGAGATTAGCACAGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGTGAAGCTGGAGTTAAGAGTTCAGTAGGGGGTCCAGCTGGTGCTTATACGACTAATCCTTTTGACCTATTTGAGACTTTCTTTGGGGCGAGTATGGGTAATTTTTCTGGGATGGACCAAACCGGATTTAGAACAAGCCGTCGTAGTACTGTTATCAAGGGTGAAGATATACGTTATGACATTACTTTGGAGTTTTCCGAGGCTATATTTGGAGCAGAAAAAGAATTTGTACTTTCTCATTTGGAAACATGTGAAGTTTGCATTGGTACCGGAGCAAAGATAGGCTCCAAGGCGAGAATATGCTCAACCTGTGGTGGCAGGGGTCAAGTCATGCGAACTGAACAAACACCTTTCGGTCTATTTTCCCAGGTCTCTGTGTGTCCAAATTGTGGTGGGGATGGTGAAGTGATTTCTGAATATTGTCGGAAATGTGCTGGTGAAGGACGTGTTCGTATTAAGAAAGATATTAAAGTTAAAGTTCCTCCTGGAGTTAGTAGAGGCAGCATTCTCCGAGTTACAGGGGAGGGTGACGCAGGACCTAAAGGGGGACCTCCAGGAGATCTTTATGTATACCTTGGTGTTGAGGAGATTCCGGAGATCAAAAGAGATGGCATAAACCTCTGTTCAACAGTTTCTATTAGCTACATAGATGCTATCTTAGGGAGTGTTGTAACGGTGAAGACAGTTGATGGGATAAATGAACTACAGATCCCCCCTGGTTCTCAGCCTGGGGATGTGGTTGTATTGGCCAAAAAAGGTGCCCCAAAGCTAAACAAACCATCAATACGTGGTGACCATTTATTCACTATTGAAGTCACTATACCAAATCGTATCAGTGCAAGGGAGCGTGAATTGCTTGAAGAACTTGCTTTGCTTAATGAGACCACCACCAGCCGTTCACGAACTCGTCCTAAACCCAAGCAACCAACTAAAACCACAGAAAGTCAGATGGACACTGACACAGAGAAATCTGAAGAATCTGGAGCGCAGAATGACTTATGGCAGAAGCTAAAAGATTTTGCAGGGTCTGTTGCAAATGGAGCTCTAAAATGGCTGAATGACAACCTCTAA 1482 0.4561 MALSISFVPSSLSFSSEQQRPQLPFSSINGRNTLWTHRQPSLSFSSIKTRKKRLSSSSSANHRFGATVVRAAADYYSTLGVPKSANIKEIKAAYRKLARQYHPDVNKQPGATEKFKEISTAYEVLSDDKKRALYDQYGEAGVKSSVGGPAGAYTTNPFDLFETFFGASMGNFSGMDQTGFRTSRRSTVIKGEDIRYDITLEFSEAIFGAEKEFVLSHLETCEVCIGTGAKIGSKARICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCAGEGRVRIKKDIKVKVPPGVSRGSILRVTGEGDAGPKGGPPGDLYVYLGVEEIPEIKRDGINLCSTVSISYIDAILGSVVTVKTVDGINELQIPPGSQPGDVVVLAKKGAPKLNKPSIRGDHLFTIEVTIPNRISARERELLEELALLNETTTSRSRTRPKPKQPTKTTESQMDTDTEKSEESGAQNDLWQKLKDFAGSVANGALKWLNDNL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00481 493 CDD DnaJ_C 192 415 - -
Eupl10g00481 493 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 288 IPR036410 -
Eupl10g00481 493 ProSiteProfiles dnaJ domain profile. 74 138 IPR001623 -
Eupl10g00481 493 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Eupl10g00481 493 Gene3D - 337 428 - -
Eupl10g00481 493 ProSiteProfiles Zinc finger CR-type profile. 208 290 IPR001305 GO:0031072|GO:0051082
Eupl10g00481 493 FunFam Putative Mitochondrial DnaJ chaperone 280 327 - -
Eupl10g00481 493 Pfam DnaJ domain 74 135 IPR001623 -
Eupl10g00481 493 CDD DnaJ_zf 221 285 IPR001305 GO:0031072|GO:0051082
Eupl10g00481 493 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 423 IPR008971 GO:0006457|GO:0051082
Eupl10g00481 493 Gene3D - 191 327 - -
Eupl10g00481 493 FunFam Molecular chaperone Hsp40/DnaJ family protein 337 429 - -
Eupl10g00481 493 NCBIfam molecular chaperone DnaJ 74 427 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl10g00481 493 Pfam DnaJ central domain 221 285 IPR001305 GO:0031072|GO:0051082
Eupl10g00481 493 Gene3D - 221 285 - -
Eupl10g00481 493 MobiDBLite consensus disorder prediction 432 452 - -
Eupl10g00481 493 FunFam Chaperone protein dnaJ A6 chloroplastic 221 285 - -
Eupl10g00481 493 FunFam Chaperone protein dnaJ A6 chloroplastic 71 177 - -
Eupl10g00481 493 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 331 IPR008971 GO:0006457|GO:0051082
Eupl10g00481 493 Gene3D DnaJ domain 71 177 IPR036869 -
Eupl10g00481 493 SMART dnaj_3 73 130 IPR001623 -
Eupl10g00481 493 MobiDBLite consensus disorder prediction 432 468 - -
Eupl10g00481 493 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 439 - -
Eupl10g00481 493 SUPERFAMILY Chaperone J-domain 72 178 IPR036869 -
Eupl10g00481 493 PRINTS DnaJ domain signature 76 94 IPR001623 -
Eupl10g00481 493 PRINTS DnaJ domain signature 110 130 IPR001623 -
Eupl10g00481 493 PRINTS DnaJ domain signature 130 149 IPR001623 -
Eupl10g00481 493 PRINTS DnaJ domain signature 94 109 IPR001623 -
Eupl10g00481 493 CDD DnaJ 74 127 IPR001623 -
Eupl10g00481 493 Pfam DnaJ C terminal domain 194 412 IPR002939 -
Eupl10g00481 493 Hamap Chaperone protein DnaJ [dnaJ]. 71 477 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00481 Eupl-Chr10 22053330 22082175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00481 75 137 C2H2 Transcription Factor Family AT1G74250 46.377 7.16e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00481 K03686 - nnu:104592493 716.072