Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00467 ATGGCGACTTTTGCAAAACCAGAGAATGCGTTGAAGCGTGCTGAAGAGTTGATCAATGTTGGACAGAAGCAAGCAGCCTTGCAAGCACTTCACGATCTGATCACGTCAAAGAGGTATCGAGCTTGGCAGAAGACGCTTGAACGGATAATGTTTAAGTATGTGGAGCTCTGTGTGGACATGCGGAGGGGTAGGTTTGCCAAGGATGGTCTGATTCAGTACCGTATCGTATGCCAGCAAGTGAATGTTAGTTCGTTGGAGGAGGTGATCAAACACTTTCTGCACCTGTCTACCGAGAGAGCTGAGCAAGCTAAAAGCCAGGCACAGGCCTTAGAGGATGCTCTGGATGTTGATGACTTGGAAGCAGATAAAAGACCCGAAGACTTAATGCTAAGTTATGTTAGTGGGGAGAAGGGAAAAGAGAGGTCCGATCGTGAACTTGTAACACCATGGTTCAAATTTCTCTGGGAAACCTACAGAACAGTGCTTGAAATTCTACGTAACAACTCTAAGTTAGAAGCTCTTTACGCAATGACAGCACACCGGGCCTTCCAGTTCTGTAAGCAATACAAACGAACAACAGAGTTTCGTAGGCTATGTGAAATCATCAGAAATCATCTGGCAAATCTCAACAAATATAGAGACCAGAGAGACAGACCTGACCTGTCATCTCCGGAAAGCTTGCAGTTGTATCTTGATACAAGATTTGATCAGCTTAAAATTGCAACTGAGCTCGAACTCTGGCAGGAAGCTTTCCGTTCTGTCGAAGATATTCATGGCTTGATGTGCATGGTTAAAAAAACCCCTAAGCCATCCCTGATGGTTGTATATTATGCCAAGTTAACAGAGATATTTTGGGTCTCAGACAGTCATCTTTATCATGCGTATGCGTGGTTCAAACTTTTCACACTCCAGAAAAGTTATAATAAGAACTTAACCCAGAAGGATTTGCAATTGATAGCATCATCTGTTGTGTTAGCTGCACTTTCAGTGACCCCTTATGATCACATGCATGGTGCATCTCATTTAGAGCTTGAAAATGAGAAAGAGCGCAGTTTGAGAATGGCTAGCCTTATAGGGTTTAGTCTTGACCCTAAACGCGATAGCAGGGAATTGCTTTCGCGGTCATCGCTTCTCTCAGAATTGGTCTCCAAAGGTGTAATGACCTGTGTATCTCAGGAAGTAAAAGATCTTTACAACCTTTTAGAACATGAGTTTCATCCTTTGGATCTTGCTTCAAAAGTTCAGCCTTTGTTAACCAAGATTTCCAAGGTTGGGGGAAAGCTTTCTTCAGCTTCTTCTGTTGCAGAAGTGCAACTATTGCAGTATGTTCCTGCCCTGGAAAAGCTTGCTACCTTGAGATTGCTACAGCAGGTTTCTCAGGTGTATCAAACAATGAAGATTGAGGTGCTATCTAGGGTGATCCCATTTTTTGATTTCTCGGTTGTGGAAAAGATTTCTGTTGATGCCATTAAATCTAATTTCATTGCCATGAAAGTTGACCATCTGAAGGGTGCGGTTCTCTTTGGTAGTTTGGATCTTGAATCAGACAGGCTTCGGGATCACCTGACCATTCTTGCTGAATCTCTGAATAAAGCAAGGGCCCTGATTTATCCTCCAGCAAAGAAGGCATCAAAACTTGGTGAGACTCTGCCTGGTTTAGCAGAGATTGTGGATAAGGAACACAAGAGGCTTCTTGCCCGGAAATCAATAATTGAGAAACGCAAGGAAGAACAAGAACGACAAATGTTGGAAATGGAACGTGAGGAAGAGTCAAAGAGGCTAAAACTGCAGAAAATAACTGAGGAGGCAGAACAGAAGAGACTTGCCTCGGAGTATTCTCGCAGGGAGGAGCAGAGGATCCGAAGAGAAATAGAGGAGAGAGAACTTGAAGAAGCCCAGGCTTTACTTCATGAAGCCGAGAAGCGTAGTAAAAAGAAGGGGAAGAAGCCGGTCATAGAAGGAGATAAAGTCACCAAGCAGTCCTTAATCGAGTTGGCTTTGAGTGAGCAACTCAGAGAGAGGCAGGAAATGGAGAAGAAATTGCAGAAACTTGCTAAAACAATGGATTATATGGAAAGAGCAAAAAGTGAAGAGCAGACACCCTTGATTGAGGCTGCATTTCAACAGCGGTTGGTGGAAGAAAAGGTTATCCATGAACGTGAGCAGCAGCTGGAGATTGATTCGAGCAGGCATCACCATGCCGGAGACCTTCAGGAGAAGAATAGGCTGGCCCGAATGTTGGACAATAAGATAATATTCCAGAATAGAATTGTCAGCCAGCGAGAAGCTGAAATTAGCAGATTGAAGAAAGAGAGAGAGGAACAGAACAGCCAACTTCGTCGGGTCCGGAGGCAAGAGATAGAGGTTAAGAGGAAGATGATATTCTATCTGAGGTTAGAGGAGGAGAGGCAAAAGAAGTTGCAGGAAGAGGAAGAAGCTCGGAAGCGTGAGGAGGCTGAAAGGCGGCGGAGGGAAGAAGCCGAGCGTAAGGCAAAGTTTGATGAGATTGCTGAAAAGCAGAGGCAAAGAGAGAGAGAAGTAGAAGAGAGGGCAAGGAAGGAGAGAGAGGCCCAGTTGGGAAGATCATATGAGCCACCTCCAAGGCCTGCTGTTGAACCTCCTGCTGGGGGCCGGCCAACTGAGCCTGTAGTTGCTGCTGCACCTGCAGCTGCACCAACCCCTGGAAGATATGTGCCCAGGTTTCGGCGGGACAGGACTGAAGGTTCTGGAGCGGCTCCAGCTCCAGAACCTGATCGATGGGGCAGACAGGATGATCGCCCACCCCAAACTGGTGACAGGTGGCGCAGTGATGATCGTAGGTCATCATTTTCTGGGAGTGGCGCCTCGAGATCATCCACATGGTCATCTAGGGGTTAA 2877 0.4588 MATFAKPENALKRAEELINVGQKQAALQALHDLITSKRYRAWQKTLERIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFLHLSTERAEQAKSQAQALEDALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSSPESLQLYLDTRFDQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYAKLTEIFWVSDSHLYHAYAWFKLFTLQKSYNKNLTQKDLQLIASSVVLAALSVTPYDHMHGASHLELENEKERSLRMASLIGFSLDPKRDSRELLSRSSLLSELVSKGVMTCVSQEVKDLYNLLEHEFHPLDLASKVQPLLTKISKVGGKLSSASSVAEVQLLQYVPALEKLATLRLLQQVSQVYQTMKIEVLSRVIPFFDFSVVEKISVDAIKSNFIAMKVDHLKGAVLFGSLDLESDRLRDHLTILAESLNKARALIYPPAKKASKLGETLPGLAEIVDKEHKRLLARKSIIEKRKEEQERQMLEMEREEESKRLKLQKITEEAEQKRLASEYSRREEQRIRREIEERELEEAQALLHEAEKRSKKKGKKPVIEGDKVTKQSLIELALSEQLRERQEMEKKLQKLAKTMDYMERAKSEEQTPLIEAAFQQRLVEEKVIHEREQQLEIDSSRHHHAGDLQEKNRLARMLDNKIIFQNRIVSQREAEISRLKKEREEQNSQLRRVRRQEIEVKRKMIFYLRLEEERQKKLQEEEEARKREEAERRRREEAERKAKFDEIAEKQRQREREVEERARKEREAQLGRSYEPPPRPAVEPPAGGRPTEPVVAAAPAAAPTPGRYVPRFRRDRTEGSGAAPAPEPDRWGRQDDRPPQTGDRWRSDDRRSSFSGSGASRSSTWSSRG* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00467 958 MobiDBLite consensus disorder prediction 806 958 - -
Eupl10g00467 958 Coils Coil 796 857 - -
Eupl10g00467 958 Gene3D - 363 493 - -
Eupl10g00467 958 Gene3D - 269 342 - -
Eupl10g00467 958 ProSiteProfiles PCI domain profile. 320 513 IPR000717 -
Eupl10g00467 958 Coils Coil 667 694 - -
Eupl10g00467 958 MobiDBLite consensus disorder prediction 918 940 - -
Eupl10g00467 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 934 IPR027512 GO:0005852
Eupl10g00467 958 MobiDBLite consensus disorder prediction 806 861 - -
Eupl10g00467 958 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Eupl10g00467 958 Coils Coil 758 792 - -
Eupl10g00467 958 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Eupl10g00467 958 MobiDBLite consensus disorder prediction 941 958 - -
Eupl10g00467 958 Pfam PCI domain 373 509 IPR000717 -
Eupl10g00467 958 Coils Coil 561 602 - -
Eupl10g00467 958 Gene3D UVR domain 217 268 - -
Eupl10g00467 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 947 IPR027512 GO:0005852
Eupl10g00467 958 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Eupl10g00467 958 Coils Coil 93 120 - -
Eupl10g00467 958 Coils Coil 613 649 - -
Eupl10g00467 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00467 Eupl-Chr10 21794796 21804042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00467 1 946 Eukaryotic Initiation Factors Gene Family AT4G11420 71.152 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00467 K03254 - ming:122059903 1392.1