Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00455 ATGGAATTTGGGTACGTTAATCCCTTGAGAATAGCTGCAGTTTTATTGGATTTGTTGATATTAGTACAGTTGCCGAGCTTCTTTGTTGCTGGATTAGTGACTTGGTCAAAGGTTTGTGGATCGAATCGGGTCACATATTTGAGTTCTTCAGACCAAGAATTGTTTTACATAAATGGTAACACAGTGGACAAAGCTTCGTTATGCAAAGCCCTCGAGTTCTACTATGCAAGCGGCTGTTTCTCTGATTCCAGTTTTGAAGAATGGAGAGGATTTGGAAAGAATTACTGTGGCTTGGATATTTCCTTAGCGGAGTTACCTCAAAGGGCAGGGAGAAAACTTCTGCTGGGGTCAGGAACAAATGAATCCACAATCCATAACCCTCGTCAAGAAAGTCATCCAAGAGAGGAAAACCACAATAGTAGTTCTTTGTTAAACCCAAAGACCATTGCCATGGGAGTTCCAGGAATGTTCCTTCTATGTTGCAGTTTACTTTGTTCATGCTTTCGCTCAAGAAGGAAAGAAACTGCCCATACTGTTCTTTGTAAGGAGTCTAAGGACCCAAGTTCAAGGGATTCAATTTCCTCTCTCGAAGTAAGTTCTTCTGAAAAAGTCCCAGCTAGTCCACTTCGAGTACCTTCTGAAAAAGTCCCAGCTAGTCCACTTCGAGTACCTTCTGAAAAAGTCCCAGCTAGTCCACTTCGAGTACCACCCAGTCCTTCACGATTCTCGATGTCCCCAAAATTGACTAGAATTGGATCAATACATCTCAATATGAGTCAGGTTACCAAAGCTACCCACAACTTCTCACCATCACAACGGGTAGGCGAAGGAGGTTTTGGAACTGTCTACCGGGCCCAGTTGCAAGATGGTCAAGTTGTTGCCATTAAACGTGCAAAGAAGGAACACTTTGACACCCTACGTTCAGAATTTATCAGTGAAGTCGAACTGCTTGCCAAAATTGAACATCGAAATCTAGTGAAGCTGCTTGGCTATGTTGATAAAGGGAATGAGCGTGTTATCATTACAGAGTATGTTTCCAATGGTACTCTTAGGGAGCATCTTGATGGTCAGCATGGAAAAATCTTGGACTTTAATCAACGGTTGGAAATTTCCATTGATATTGCCCATGGCCTTACTTATCTCCATCTGTACACAGAGAAGCAGATAATTCATCGAGATGTGAAGTCTTCCAACATTCTGCTGACAGAGAGCTTCAGAGCCAAGGTGGCCGATTTTGGATTTGCGAGACTTGGTCCAATGGAAGCAGATAAGACACACATCTCAACCCAAGTGAAAGGGACTGCTGGTTATCTCGACCCTGAGTATCTGAGGACCTATCAACTCACTCCCAAGAGTGATGTATATTCATTCGGAATTTTGCTCATAGAAATTCTGACTGGGCGTCGCCCAGTGGAATTGAAGAGAGCTGCTGATGAGAGGGTCACTGTTAGATGGGCCTTCAAGAAGTATACTGAAGGAATTTTGCTGGAGATGTTGGATCCTTTGATGGAAGAAGCAGTGGATGCAGGGATTGTGTCAAAGATGTTTGGTTTGGCGTTCCAGTGTGCTGCACCTACACGGTTAGATCGGCCAAACATGAAAGAAGTGGGAGAGCAACTATGGGCAATAAGGATGGACTACCTTAGGACTGTCAAGAGAGGGTAG 1665 0.4372 MEFGYVNPLRIAAVLLDLLILVQLPSFFVAGLVTWSKVCGSNRVTYLSSSDQELFYINGNTVDKASLCKALEFYYASGCFSDSSFEEWRGFGKNYCGLDISLAELPQRAGRKLLLGSGTNESTIHNPRQESHPREENHNSSSLLNPKTIAMGVPGMFLLCCSLLCSCFRSRRKETAHTVLCKESKDPSSRDSISSLEVSSSEKVPASPLRVPSEKVPASPLRVPSEKVPASPLRVPPSPSRFSMSPKLTRIGSIHLNMSQVTKATHNFSPSQRVGEGGFGTVYRAQLQDGQVVAIKRAKKEHFDTLRSEFISEVELLAKIEHRNLVKLLGYVDKGNERVIITEYVSNGTLREHLDGQHGKILDFNQRLEISIDIAHGLTYLHLYTEKQIIHRDVKSSNILLTESFRAKVADFGFARLGPMEADKTHISTQVKGTAGYLDPEYLRTYQLTPKSDVYSFGILLIEILTGRRPVELKRAADERVTVRWAFKKYTEGILLEMLDPLMEEAVDAGIVSKMFGLAFQCAAPTRLDRPNMKEVGEQLWAIRMDYLRTVKRG* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00455 554 CDD STKc_IRAK 274 540 - -
Eupl10g00455 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Eupl10g00455 554 Gene3D Transferase(Phosphotransferase) domain 1 345 552 - -
Eupl10g00455 554 Gene3D Phosphorylase Kinase; domain 1 240 344 - -
Eupl10g00455 554 ProSiteProfiles Protein kinase domain profile. 268 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00455 554 SUPERFAMILY Protein kinase-like (PK-like) 250 544 IPR011009 -
Eupl10g00455 554 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 240 344 - -
Eupl10g00455 554 SMART serkin_6 268 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00455 554 PANTHER OS01G0750732 PROTEIN 94 542 - -
Eupl10g00455 554 MobiDBLite consensus disorder prediction 117 145 - -
Eupl10g00455 554 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 345 554 - -
Eupl10g00455 554 Pfam Protein tyrosine and serine/threonine kinase 272 540 IPR001245 GO:0004672|GO:0006468
Eupl10g00455 554 MobiDBLite consensus disorder prediction 181 244 - -
Eupl10g00455 554 ProSitePatterns Protein kinases ATP-binding region signature. 274 300 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00455 Eupl-Chr10 21488836 21512414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00455 240 543 Receptor kinase-like Gene Family AT3G46290 43.648 7.68e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Eupl10g00455 PK_Tyr_Ser-Thr 4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00455 - - msin:131258375 711.064