Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00438 ATGGCCCAGGGAAAGCTTATACTGATTTGCCAGTCTGGTGGCGAGTTTGTGAAAAAGAAAGATGGGTCTTTGTCATACACTGGTGGAGAAGCGCATGCTGTAGACATCGATCATGACACCCGGTTCGATGATCTAAAGTTAGAATTAGCTGATATGTGGAATTGTGACATGGAAACCATGTCTGTCAAGTACTTCATTCCCAGTAATAAACGCACTCTCATTACTGTATCTAATGACAAAGACCTACAGAGAATGATTGATTTCCATGGGGATTTGGTAACAGCAGATGTTTATGTTGTTGCAAGAGAAAGCGCTGCTCATGATTCCTCGAACATGCCCACTAACAGGGCAAGTAGGACAATAGTAGCTGATTCAGACCACCAGGCTGCTGCTACTACCCCCATAGCTGCTGCTGCTCCAGTTCTTGACGCAGCTCCTCTTGCCACTGCCGTCTCCGCTGCTGCTACTGTTGTCACTGATACCACTACTGCTCCCCCCCCTGCTGCCACCCCCAGCCCCACTACCACTGCTGTTACCCCCACCCCAGCCATCCCTGGCGCTGATCCTGCTGCCACTACTGCTAGCTCTTCTATTGCTGTTGCTGATACAACTACCCCCACCACCACTCCCAGCCCCAACAGAGTTGCGGCTACCTCTGCTGCAGCCACAACTGCTCCCGTTCATGGTGCCATTGCTGATGATGTTGGGAAGCAAAGACGCACCGCATCCTGGAAAATTGGCACCAATGGTTTCACTATTGTTTCCATCGCTGATGATGTTGGGCAGCAAAGACTCACTGAATCCTGGAATAATGATATCAACAGTCCCACTACTACTGCCGTTGGTGATGATGTTGAAGAGCAAAGATGCACTGCATCCTGGGAAAATGATGCCAACAGTCCCACTACTGTTGCTGTTGGTGATGATGTTGGGCAGCAAAGACTTGTTGAATCATGGAGAAATGGTATCACTGGTGTGGGCCAGCAATTCAGTAGCGTCCATGAATTTCGTGATGCATTGCGGAGATATGCTATTGCAAATCACTTTGTGTACAAGTTTAAAAAAAACGATGGCAACCGTGTAAGTGCCAAATGTAGATCCGATGGCTGTTCATGGCGGATACATGCATCATGGGTGCCAGCTGCACGATCATTTAGGATAAAAAAGATGAACAAATCACATACATGTGGAGATATTTGCACATCTGCTCACCCTCAAGCAACAAAACATTGGCTGGCCAGTATTTTAAGGGACAAGTTGAGAGATAGCCCACATTACAAGCCCAAGGAAATTGTGAGTGATATCTGTCGAGATTTTGGCATTGAATTGAACTATTCGCAGGCATGGCGCGGAATGGAGATGGCCAGGGAGCAACTTCAGGGTTCATACAAGGAGGCATATAATCAATTGCCTTGGTTTTGTGAGAGGGTGGTAGAGACAAACCCAGGGAGTGTTGCAAGGTTTACCACTAAGGATGCCTTAAGCTTCCAACGTCTTTTTATCTCTTTTCATGCCTCATTACATGGTTTCCAGAATGGTTGCCGCCCCCTCCTTTTCCTTGATTCTACATCTCTAAAATCAAAATACCAAGAGATATTGTTGGTGGCAGCCGCAGTGGATGGGGATGATGGCATTTTTCCAGTTGCCTTTGCTATAGCAGATGTCGAGGATGATGATAATTGGCATTGGTTTTTGGAGCAATTGAAGTCTGTAGTGTCAACATCGGGATCCATAACGTTTGTGTCAGATAGAGAGAAAGGGTTAAGGAAGTCTGTGCAAGAGGTATTTGAGAATGCTCACCATGGGTATTGTATACGTCACCTCGTGGAGAACTTCAAGAAAAACTTGAAGGGTCCTTTTCATGGAGATGGGAAGGGTTCTTTGGCTGGCAACTTTCTGGCTGCTGCCCAAGCACTCCGACTTGATGGGTTTAGAAAATGCACTGAGAGCATTAAAAGTGTTTCATCAGAAGCTTACAATTGGGTCATGGAAAGTGAGCCGGAATATTGGTCGAACGCACAATTTAAAGGTGAGCGATACAACCAAATCACATTAGATATTGTAGAGTCATTCGATAACTGGATAGCAGAGGTGCGTGAATTACCAATAACACAGAAGATCGACGCCATACGGTGTAAGATGATGGAGTTGATCCATACACGTCGGGTGGATTCAAGTAATTGGCCTACAAAACTAACACCGTCTAAGGAGGAAAAACTACAGGAAGAGGCGCTAAAAGCCCATTCCCTTAAAGTGTTATTCTCGTCTGATAGCACGTTCGAGGTTCATGATGATTCCATTAATGTCGTTAACATCGATCAGCGGGAATGTAGTTGCCTGGGGTGGAAAATAACTGGTCTACCTTGCTGTCATGCTATAGCTGTCTTTAATTGCACTGGTAGGAGCCCGTATGATTACTGTTCCAGATATTTCACAACTGAAACTTTCCAGTTAACGTATTCAGAGTCGATAAATGCTGTGCCAGACATAGGCAAGCCTGTGAATAGAGAATCCTCAGACAAGGTGCAAGTTCATCCTCCACGTCCTTGTACCAGTCATCCACCAAGCCAACCGAAGAGGAAGAGGACCAAAGCCCAGGAGGTACTTAAAAGGTCACTTCATTGCAGTAGATGCAAGGGAGCAGGGCACAATAGGGCTACATGCAAAGCAATGGAGTAG 2679 0.461 MAQGKLILICQSGGEFVKKKDGSLSYTGGEAHAVDIDHDTRFDDLKLELADMWNCDMETMSVKYFIPSNKRTLITVSNDKDLQRMIDFHGDLVTADVYVVARESAAHDSSNMPTNRASRTIVADSDHQAAATTPIAAAAPVLDAAPLATAVSAAATVVTDTTTAPPPAATPSPTTTAVTPTPAIPGADPAATTASSSIAVADTTTPTTTPSPNRVAATSAAATTAPVHGAIADDVGKQRRTASWKIGTNGFTIVSIADDVGQQRLTESWNNDINSPTTTAVGDDVEEQRCTASWENDANSPTTVAVGDDVGQQRLVESWRNGITGVGQQFSSVHEFRDALRRYAIANHFVYKFKKNDGNRVSAKCRSDGCSWRIHASWVPAARSFRIKKMNKSHTCGDICTSAHPQATKHWLASILRDKLRDSPHYKPKEIVSDICRDFGIELNYSQAWRGMEMAREQLQGSYKEAYNQLPWFCERVVETNPGSVARFTTKDALSFQRLFISFHASLHGFQNGCRPLLFLDSTSLKSKYQEILLVAAAVDGDDGIFPVAFAIADVEDDDNWHWFLEQLKSVVSTSGSITFVSDREKGLRKSVQEVFENAHHGYCIRHLVENFKKNLKGPFHGDGKGSLAGNFLAAAQALRLDGFRKCTESIKSVSSEAYNWVMESEPEYWSNAQFKGERYNQITLDIVESFDNWIAEVRELPITQKIDAIRCKMMELIHTRRVDSSNWPTKLTPSKEEKLQEEALKAHSLKVLFSSDSTFEVHDDSINVVNIDQRECSCLGWKITGLPCCHAIAVFNCTGRSPYDYCSRYFTTETFQLTYSESINAVPDIGKPVNRESSDKVQVHPPRPCTSHPPSQPKRKRTKAQEVLKRSLHCSRCKGAGHNRATCKAME* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00438 892 MobiDBLite consensus disorder prediction 830 864 - -
Eupl10g00438 892 CDD PB1_UP2 9 95 - -
Eupl10g00438 892 Pfam PB1 domain 21 89 IPR000270 GO:0005515
Eupl10g00438 892 ProSiteProfiles Zinc finger SWIM-type profile. 768 800 IPR007527 GO:0008270
Eupl10g00438 892 MobiDBLite consensus disorder prediction 190 220 - -
Eupl10g00438 892 SMART PB1_new 19 102 IPR000270 GO:0005515
Eupl10g00438 892 MobiDBLite consensus disorder prediction 161 222 - -
Eupl10g00438 892 PANTHER POLYPROTEIN, PUTATIVE-RELATED 313 858 - -
Eupl10g00438 892 Pfam MuDR family transposase 323 387 IPR004332 -
Eupl10g00438 892 Pfam SWIM zinc finger 770 798 IPR007527 GO:0008270
Eupl10g00438 892 Pfam MULE transposase domain 518 611 IPR018289 -
Eupl10g00438 892 SMART 26again6 775 802 IPR006564 GO:0008270
Eupl10g00438 892 SUPERFAMILY CAD & PB1 domains 21 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00438 Eupl-Chr10 21195937 21201220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00438 5 92 MAP Kinase Kinase Kinase AT1G79570 28.889 5.60e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00438 - - tss:122669165 1130.55