Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00422 ATGAGTGCTACAGATGGTCTGATGAGAGGAATGGAAGTGATTGACACGGGAGCTCCTCTAAGTGTTCCAGTCGGTGGAGCGACTCTCGGACGAATTTTCAACATTCTTGGAGAGCCTGTTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCTGCGCCTGCCTTTATACAGTTAGATACCAAATTATCTATTTTTGAAACAGGGATTAAAGTAGTGGATCTTTTAGCTCCTTATCGCCGTGGAGGAAAAATCGGACTATTCGGGGGAGCTGGAGTGGGTAAAACAGTACTCATCATGGAATTGATCAACAACATTGCCAAAGCTCATGGAGGTGTATCTGTATTTGGCGGAGTAGGTGAACGTACTCGTGAAGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTGATTAATGAACAAAATATTGCAAAATCAAAAGTAGCTCTAGTCTATGGTCAGATGAATGAACCGCCGGGAGCTCGTATGAGAGTTGGTTTGACTGCCCTAACCATGGCGGAATATTTTTGGGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATTTTCCATTTCGTCCAAGCAGGATCTGAAGTATCTGCCTTATTAGGCAGAATGCCTTCTGTTGTGGGTTATCAACCTACCCTTAGTACAGAAATGGGTTCTTTGCAAGAAAGAATTACTTCCACCAAAGAGGGATCCATAACTTCTATTCAAGCAGTTTATGTACCTGCGGACGATTTGACCGACCCTGCTCCTGCCACGACATTTGCGCATTTAGATGCTACTACCATACTATCAAGAGGACTAGCTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAATGTCAACTATGCTCCAAGCTTGGATCGTTGGTGAGGAACATTATGAAACTGCGCAAAGAGTTAAGCAAACTTCACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCATTTAACCGTAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCCCAACCCTTCTTCGTAGCAGAAGTATTTACCGGTTCTCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGGGGGTTTCAACTGATCCTTTCCGGAGAATTAGATGGTCTTCCCGAACAGGCCTTTTATTTGGTAGGTAACATCGATGAAGCTACTGCGAAGGCTATGAACTTAGAAGTGGAGAGCAAATTGAAGAAATGA 1263 0.422 MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNILGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAKSKVALVYGQMNEPPGARMRVGLTALTMAEYFWDVNEQDVLLFIDNIFHFVQAGSEVSALLGRMPSVVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTILSRGLAAKGIYPAVDPLDSMSTMLQAWIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEEDHLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEVESKLKK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00422 420 SMART AAA_5 86 278 IPR003593 GO:0016887
Eupl10g00422 420 FunFam ATP synthase subunit beta 20 296 - -
Eupl10g00422 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 300 IPR027417 -
Eupl10g00422 420 FunFam ATP synthase subunit beta 297 416 - -
Eupl10g00422 420 Gene3D - 297 420 IPR024034 -
Eupl10g00422 420 Gene3D - 20 296 IPR027417 -
Eupl10g00422 420 PANTHER ATP SYNTHASE 1 417 - -
Eupl10g00422 420 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 297 412 - -
Eupl10g00422 420 ProSitePatterns ATP synthase alpha and beta subunits signature. 285 294 IPR020003 GO:0005524
Eupl10g00422 420 CDD ATP-synt_F1_beta_C 301 408 - -
Eupl10g00422 420 Hamap ATP synthase subunit beta [atpB]. 1 412 IPR005722 GO:0015986|GO:0045261|GO:0046933
Eupl10g00422 420 NCBIfam F0F1 ATP synthase subunit beta 1 412 IPR005722 GO:0015986|GO:0045261|GO:0046933
Eupl10g00422 420 CDD F1-ATPase_beta_CD 21 298 - -
Eupl10g00422 420 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 74 294 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00422 Eupl-Chr10 20931373 20932635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00422 16 351 Primary Pumps ATPases(2) AT1G20260 26.776 3.24e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00422 K02112 - msin:131240605 795.038