Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00411 ATGGTAACCATTCGAGCCGACGAAATTAGTAATATTATCCGTGAACGTATTGAGCAATATACTAGAGAAGTAAAGATTGTGAATACCGGCACCGTACTTCAAGTAGGCGACGGCATTGCTCGTATTCATGGTCTTGATGAAGTAATGGCAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTGAGCGAGGCTTATTTGGGTCGTGTTATAAATGCTCTGGCTAAACCTATTGATGGTAGAGGCAAAATTTCAACTTCTGAATCTCGGTTAATTGAATCCCCTGCTCCAGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAGGTAGTGACTACTTTCCAGGAACGGGGGGCGATGGAATACACTATTGTGGTAGCCGAAACGGCAGACTCGCCTGCTACATTACAATACCTCGCTCCTTATACAAGAGCGGCTCTGGCTGAATATTTTATGTACCGTGAACGACATACTTCAATCATTTATGATGATCCCTCTAAACAGGCACAAGCTTATCGCCAAATGTCTCTTTTATTACAAAGACCACCCGGTCGCGAAGCTTATCCAGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCACTAAATCAAGTTCTCGTTTAGGTGAAGGAAGTATGACCGCTTTACCAATAGTGGAGACTCAATTGAGAGACGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGGCGATCTATTCAATGCTGGAATCCGACCTGCTATTAATGTGGGTATTTTTGTCTCCAGAGTAGGATCCGCAGCCCAAATTAAAGCCATGAAACAAGTAGCTGGCAAATCAAAATTGGAACTGGCTCAATTCGCAGAGTTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTGGAAGAGCAGATAGTGACTATTTATACCGGAAAGAATGGGTATCTTGATTCGTTAGAAATTGGACAGGTAAAGAAATTTCTCGTTCAATTACGTACCTACTTAAAAACGAATAAACCTCAATTCCAAGAAATCATATCTTCTACCAAGACATTCACCGAGGAAGCAGAAGTCCTTTTGAAGGAAGCTATTCAGGAACAAATAGAACGGTTTCTACTTCAAGAACAAACATAA 1236 0.4142 MVTIRADEISNIIRERIEQYTREVKIVNTGTVLQVGDGIARIHGLDEVMAEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGKISTSESRLIESPAPAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTRAALAEYFMYRERHTSIIYDDPSKQAQAYRQMSLLLQRPPGREAYPGDVFYLHSRLLERATKSSSRLGEGSMTALPIVETQLRDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGIFVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIVTIYTGKNGYLDSLEIGQVKKFLVQLRTYLKTNKPQFQEIISSTKTFTEEAEVLLKEAIQEQIERFLLQEQT* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00411 411 CDD ATP-synt_F1_alpha_C 280 405 IPR000793 GO:0015986
Eupl10g00411 411 Gene3D - 103 276 IPR027417 -
Eupl10g00411 411 Gene3D - 64 102 IPR027417 -
Eupl10g00411 411 Gene3D - 277 405 IPR038376 -
Eupl10g00411 411 FunFam ATP synthase subunit alpha, mitochondrial 100 276 - -
Eupl10g00411 411 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 51 IPR036121 GO:0046034|GO:1902600
Eupl10g00411 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 275 IPR027417 -
Eupl10g00411 411 FunFam ATP synthase subunit alpha 277 407 - -
Eupl10g00411 411 Pfam ATP synthase alpha/beta chain, C terminal domain 276 400 IPR000793 GO:0015986
Eupl10g00411 411 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 102 268 IPR000194 GO:0005524
Eupl10g00411 411 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 277 405 - -
Eupl10g00411 411 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 49 103 IPR005294 GO:0015986|GO:0045261|GO:0046933
Eupl10g00411 411 Gene3D - 2 63 IPR023366 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00411 117 303 Primary Pumps ATPases(2) AT4G38510 28.638 8.58e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00411 K02111 - ppp:2546698 551.206