Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00405 ATGATTCAACCTCAGACCCATTTAAATGTAGCGGATAACAGCGGGGCTCGAGAATTGATGTTTATTCGAATCATAGGAGCTAGTAATCGCCGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAAGAAGCAGTGCCCAATATGCCCCTCGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACATGTAAAGAACTCAAACGTGATAATGGTATGATAATACGATATGATGACAATGCAGCAGTTGTAATTGATCAAGAAGGAAATCCAAAAGGAACTCGAGTTTTTGGTGCGATCGCTCGGGAATTGAGACAGTTGAATTTTACTAAAAATAGTCTCATTAGCTCCTGA 360 0.3944 MIQPQTHLNVADNSGARELMFIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKNSLISS* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00405 119 Hamap 50S ribosomal protein L14 [rplN]. 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Eupl10g00405 119 SMART Ribosomal_L14_2 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 113 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 Pfam Ribosomal protein L14p/L23e 1 114 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 NCBIfam 50S ribosomal protein L14 1 117 IPR005745 GO:0003735|GO:0006412|GO:0015934
Eupl10g00405 119 SUPERFAMILY Ribosomal protein L14 1 116 IPR036853 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 Gene3D Ribosomal protein L14 1 118 IPR036853 GO:0003735|GO:0005840|GO:0006412
Eupl10g00405 119 FunFam 50S ribosomal protein L14, chloroplastic 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00405 Eupl-Chr10 20801329 20801688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00405 8 109 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.906 2.26e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00405 K02874 - ming:20832736 218.394