Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00390 ATGGCTATCAAGAGAGGCCTCGCCAGTAGTGCACTCTTCCTTTTCATTTTATCTTGCTGCTTCATGGGATCTTGTTCTGCACCACCAAACAACATCACACAAGACCAACAGCTCAGGGACTATCAGCACCTAGTTTCCCCCAGCAAGATCTTCAAATTAGGATTCTTCAAAGTCGGTAATTCGGAGAACAAGTACTTGGGTATATGGTTCTACGAATCTCCCGAGCTCGCTGTGTGGGTTGCCAACCGAGACACCCCAATCGTGGACTCCTCGGGGACTCTTACGATCGTTGATGGCAAATTGACAATCACACACAGTGGAGGGAGGCCTATCGTGGTAAGTTCCAATCAAAACACTAGCAACGCGACTGCTAAGCTAATGGATTCTGGTAATTTTGTGTTGATAGATGCAGATTCCAACATGGTCTTGTGGGAGAGCTTTGATTATCCGACCCATGCACTTCTGCACGGAATGAAACTTGGTCTGAATTTTAAGACAGGACATAATTGGTCGCTTACTTCCTGGTTAACCAACGACCTCCCAGCTACCGGGGCTTTCACTCTAAGTGTGGACCCCAATGCGACAAGCCAGTTGCGTATTTGGCGGCGAGGGGATATTTACTGGACTAGCCAGTCCTGGAACAATCAGAGTTCCGATCATCTCTTGACATCCGATAACTTCATTTACGTTTCAAATGAGAATGAGAACTACTTCATTTATTCTCCCAAGCAATCTTATCCTTTAACAGTTCCGTTTATCGACTCGTGGGGCAAAATCGCTCTATATAGTTGGGAGTCTTTGGACCATGGCGGTTATTCAATTTCTACATCTGAATTAATTGGTCTATGTGAAGACGATTCATTTGATCAGATTGAGTGTGTGGAGCAGAATTGCAGTAGTCGTGCCACACGGTACGAGCTAAAAAATGCCTCTAACGTAGCCGTAGATATTGCCTACGACAAGGCCTTGGACCCGAGTCTGGGTCTGAGTGATTGCGAGGCCAAGTGCTTGAACAACTGTAACTGTGTTGCCTATGCTTCTTATTTCAAAAATAAAACGGGATGCCTGTTTTATGATCAGAGCGGTGAGGAATCTATGGGGCCAGCTGATGCTGATGGCGGGTTTTATGCTTATTTTCTTTACTGGAAGTGGAAGGAGAATGCAACCACAGCCTACTCTCCGAATGCAACCACAGACTACGCTCCGAATGAAGCGATCTCGCCTTGCCCCAGCTTACACATCAAAAAGAAAAGAAACAACTGGTGGACAGTGTTGATTATAGCAGTAGCAGCTGCTCTACTAATGCTTCACTTGGGTTCCATGTGCTATTCACAAAGGAGAGGTCTCAAAATAACAGAGAATGAAAAAAATCAAGACAACAGGCTAATACTTGCATTAGGAACTAATACAACAACTTCCAACAAATTTAGCAATGCAAATAAGCTGGGAAAAGACAGGAAGAAGGATCATGAGTTGCAATTATTCAGTTTTGACATCATATTAGCTGCCACAGATGACTTCTCATCTACAAATAAGCTTGGACAAGGTGGATTTGGTCCTGTTTACAAGGGCAAATTATTCGAGGGACGAGAAATAGCAGTGAAAAGACTTTCGAGAAGTTCGGGACAAGGACTAGAAGAGTTCAAAAACGAAATTGAACTTATTGCGAAACTCCAACATATGAATCTTGTTGGGCTTTTGGGTTACTGCATCGAAGGAGAAGAAATGATGTTAATCTATGAATACATGTCCAACAAAAGCCTGGATTCCTTCCTTTTTGATCCTGCCAAACGCGGACTATTAGATTGGAATAGACGTTTCAACATCATTGAAGGGATCGCTCAAGGGATTCTTTATCTTCATAAATATTCTAGATTGAGAGTCATCCATAGAGATCTAAAAGCTAGCAACATTTTACTGGACGATGAGATGAACCCTAAAATATCTGATTTTGGCATGGCTAGAATTTTTGGGCAGAATGAATCTGAAGTAAATACAAATAGGATTGTCGGGACATATGGTTACATGTCTCCTGAGTACGCCATGGAGGGAATTTTCTCAATCAAGTCTGATGTCTTTAGCTTTGGGGTCTTACTACTAGAGATCCTAAGTGGCAGGAAGAACACCAGTTTTTATAATCTTGATTGTCCTCTCAACCTGATAGGATATGTATGGGAGTTGTGGATAGAAGGTAGGGGCCTAGAGGTGATTGATCCATTGTTGGGTGATGCATCTCCCAAACATGAACTGTTGAGATTTATTCATGTAGGTCTCTTGTGTGTACAACAAAATGCAGTAGATAGACCCACCATGTCAGATGTTAGCTCTATGCTCAGTAATGAAACTATACCTCTGCCTGCTCCAAAACAACCTGCCTTTTCTATCTTTGAGGCAGATTTACACAGAGGGAAAACGGAAAATTGTTCTTTAAATGATGTAACCATTTCAGTGATGAAAGCCCGCTAG 2466 0.4266 MAIKRGLASSALFLFILSCCFMGSCSAPPNNITQDQQLRDYQHLVSPSKIFKLGFFKVGNSENKYLGIWFYESPELAVWVANRDTPIVDSSGTLTIVDGKLTITHSGGRPIVVSSNQNTSNATAKLMDSGNFVLIDADSNMVLWESFDYPTHALLHGMKLGLNFKTGHNWSLTSWLTNDLPATGAFTLSVDPNATSQLRIWRRGDIYWTSQSWNNQSSDHLLTSDNFIYVSNENENYFIYSPKQSYPLTVPFIDSWGKIALYSWESLDHGGYSISTSELIGLCEDDSFDQIECVEQNCSSRATRYELKNASNVAVDIAYDKALDPSLGLSDCEAKCLNNCNCVAYASYFKNKTGCLFYDQSGEESMGPADADGGFYAYFLYWKWKENATTAYSPNATTDYAPNEAISPCPSLHIKKKRNNWWTVLIIAVAAALLMLHLGSMCYSQRRGLKITENEKNQDNRLILALGTNTTTSNKFSNANKLGKDRKKDHELQLFSFDIILAATDDFSSTNKLGQGGFGPVYKGKLFEGREIAVKRLSRSSGQGLEEFKNEIELIAKLQHMNLVGLLGYCIEGEEMMLIYEYMSNKSLDSFLFDPAKRGLLDWNRRFNIIEGIAQGILYLHKYSRLRVIHRDLKASNILLDDEMNPKISDFGMARIFGQNESEVNTNRIVGTYGYMSPEYAMEGIFSIKSDVFSFGVLLLEILSGRKNTSFYNLDCPLNLIGYVWELWIEGRGLEVIDPLLGDASPKHELLRFIHVGLLCVQQNAVDRPTMSDVSSMLSNETIPLPAPKQPAFSIFEADLHRGKTENCSLNDVTISVMKAR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00390 821 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Eupl10g00390 821 Pfam PAN-like domain 315 358 IPR003609 -
Eupl10g00390 821 SMART serkin_6 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00390 821 PIRSF SRK 2 285 IPR024171 GO:0004674
Eupl10g00390 821 PIRSF SRK 283 821 IPR024171 GO:0004674
Eupl10g00390 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 123 801 - -
Eupl10g00390 821 Pfam Protein tyrosine and serine/threonine kinase 510 775 IPR001245 GO:0004672|GO:0006468
Eupl10g00390 821 Pfam D-mannose binding lectin 78 175 IPR001480 -
Eupl10g00390 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 178 IPR036426 -
Eupl10g00390 821 Pfam Domain of unknown function (DUF3403) 780 821 IPR021820 GO:0004674
Eupl10g00390 821 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Eupl10g00390 821 SUPERFAMILY Protein kinase-like (PK-like) 490 796 IPR011009 -
Eupl10g00390 821 Gene3D - 26 147 IPR036426 -
Eupl10g00390 821 CDD B_lectin 38 150 IPR001480 -
Eupl10g00390 821 FunFam Receptor-like serine/threonine-protein kinase SD1-8 24 147 - -
Eupl10g00390 821 ProSiteProfiles PAN/Apple domain profile. 298 380 IPR003609 -
Eupl10g00390 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Eupl10g00390 821 Gene3D Phosphorylase Kinase; domain 1 480 582 - -
Eupl10g00390 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 472 582 - -
Eupl10g00390 821 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Eupl10g00390 821 CDD STKc_IRAK 513 778 - -
Eupl10g00390 821 SMART blect_4 35 150 IPR001480 -
Eupl10g00390 821 ProSiteProfiles Protein kinase domain profile. 507 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00390 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00390 Eupl-Chr10 19728917 19733600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00390 490 821 Receptor kinase-like Gene Family AT4G11530 58.187 3.49e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl10g00390 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00390 - - nnu:104592220 795.423