Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00380 ATGGCCCAGGGAAAGCTTATACTGATTTGCCAGTCTGGTGGCGAGTTTGTGAAAAAGAAAGATGGGTCTTTGTCATACACTGGTGGAGAAGCGCATGCTGTAGACATCGATCATGACACCCGGTTCGATGATCTAAAGTTAGAATTAGCTGATATGTGGAATTGTGACATGGAAACCATGTCTGTCAAGTACTTCATTCCCAGTAATAAACGCACTCTCATTACTGTATCTAATGACAAAGACCTACAGAGAATGATTGATTTCCATGGGGATTTGGTAACAGCAGATGTTTATGTTGTTGCAAGAGAAAGCGCTGCTCATGATTCCTCGAACATGCCCACTAACAGGGCAAGTAGGACAATAGTAGCTGATTCAGACCACCAGGCTGCTGCTACTACCCCCATAGCTGCTGCTGCTGCTGCTGCTCCAGTTCTTGACGCAGCTCCTCTTGCCACTGCCGTCTCCGCTGCTGCTACTGTTGTCACTGATACCACTACTGCTCCCCCCCCTGCTGCCACCCCCAGCCCCACTACCACTGCTGTTACCCCCACCCCAGCCATCCCTGGCGCTGATCCTGCTGCCACTACTGCTAGCTCTTCTATTGCTGTTGCTGATACAACTACCCCCACCACCACTCCCAGCCCCAACAGAGTTGCGGCTACCTCTGCTGCAGCCACAACTGCTCCCGTTCATGGTGCCATTGCTGATGATGTTGGGAAGCAAAGACGCACCGCATCCTGGAAAATTGGCACCAATGGTTTCACTATTGTTTCCATCGCTGATGATGTTGGGCAGCAAAGACTCACTGAATCCTGGAATAATGATATCAACAGTCCCACTACTACTGCCGTTGGTGATGATGTTGAAGAGCAAAGATGCACTGCATCCTGGGAAAATGATGCCAACAGTCCCACTACTGTTGCTGTTGGTGATGATGTTGGGCAGCAAAGACTTGTTGAATCATGGAGAAATGGTATCACTGGTGTGGGCCAGCAATTCAATAGCGTCCATGAATTTCGTGATGCATTGCGGAGATATGCTATTGCAAATCACTTTGTGTACAAGTTTAAAAAAAACGATGGCAACCGTGTAAGTGCCAAATGTAGATCCGATGGCTGTTCATGGCGGATACATGCATCATGGGTGCCAGCTGCACGATCATTTAGGATAAAAAAGATGAACAAATCACATACATGTGGAGATATTTGCACATCTGCTCACCCTCAAGCAACAAAACATTGGCTGGCCAGTATTTTAAGGGACAAGTTGAGAGATAGCCCACATTACAAGCCCAAGGAAATTGTGAGTGATATCTGTCGAGATTTTGGCATTGAATTGAACTATTCGCAGGCATGGCGCGGAATGGAGATGGCCAGGGAGCAACTTCAGGGTTCATACAAGGAGGCATATAATCAATTGCCTTGGTTTTGTGAGAGGGTGGTAGAGACAAACCCAGGGAGTGTTGCAAGGTTTACCACTAAGGATGCCTTAAGCTTCCAACGTCTTTTTATCTCTTTTCATGCCTCATTACATGGTTTCCAGAATGGTTGCCGCCCCCTCCTTTTCCTTGATTCTACATCTCTAAAATCAAAATACCAAGAGATATTGTTGGTGGCAGCCGCAGTGGATGGGGATGATGGCATTTTTCCAGTTGCCTTTGCTATAGCAGATGTCGAGGATGATGATAATTGGCATTGGTTTTTGGAGCAATTGAAGTCTGTAGTGTCAACATCGGGATCCATAACGTTTGTGTCAGATAGAGAGAAAGGGTTAAGGAAGTCTGTGCAAGAGGTATTTGAGAATGCTCACCATGGGTATTGTATACGTCACCTCGTGGAGAACTTCAAGAAAAACTTGAAGGGTCCTTTTCATGGAGATGGGAAGGGTTCTTTGGCTGGCAACTTTCTGGCTGCTGCCCAAGCACTCCGACTTGATGGGTTTAGAAAATGCACTGAGAGCATTAAAAGTGTTTCATCAGAAGCTTACAATTGGGTCATGGAAAGTGAGCCGGAATATTGGTCGAACGCACAATTTAAAGGTGAGCGATACAACCAAATCACATTAGATATTGTAGAGTCATTCGATAACTGGATAGCAGAGGTGCGTGAATTACCAATAACACAGAAGATCGACGCCATACGGTGTAAGATGATGGAGTTGATCCATACACGTCGGGTGGATTCAAGTAATTGGCCTACAAAACTAACACCGTCTAAGGAGGAAAAACTACAGGAAGAGGCGCTAAAAGCCCATTCCCTTAAAGTGTTATTCTCGTCTGATAGCACGTTCGAGGTTCATGATGATTCCATTAATGTCGTTAACATCGATCAACGGGAATGTAGTTGCCTGGGGTGGAAAATAACTGGTCTACCTTGCTGTCATGCTATAGCTGTCTTTAATTGCACTGGTAGGAGCCCGTATGATTACTGTTCCAGATATTTCACAACTGAAACTTTCCAGTTAACGTATTCAGAGTCGATAAACGCTGTGCCAGACATAGGCAAGCCTGTGAATAGAGAATCCTCAGACAAGGTGCAAGTTCATCCTCCACGTCCTTGTACCAGTCATCCACCAAGCCAACCGAAGAGGAAGAGGACCAAAGCCCAGGAGGTACTTAAAAGGTCACTTCATTGCAGTAGATGCAAGGGAGCAGGGCACAATAGGGCTACATGCAAAGCAATGGAGTAG 2688 0.4613 MAQGKLILICQSGGEFVKKKDGSLSYTGGEAHAVDIDHDTRFDDLKLELADMWNCDMETMSVKYFIPSNKRTLITVSNDKDLQRMIDFHGDLVTADVYVVARESAAHDSSNMPTNRASRTIVADSDHQAAATTPIAAAAAAAPVLDAAPLATAVSAAATVVTDTTTAPPPAATPSPTTTAVTPTPAIPGADPAATTASSSIAVADTTTPTTTPSPNRVAATSAAATTAPVHGAIADDVGKQRRTASWKIGTNGFTIVSIADDVGQQRLTESWNNDINSPTTTAVGDDVEEQRCTASWENDANSPTTVAVGDDVGQQRLVESWRNGITGVGQQFNSVHEFRDALRRYAIANHFVYKFKKNDGNRVSAKCRSDGCSWRIHASWVPAARSFRIKKMNKSHTCGDICTSAHPQATKHWLASILRDKLRDSPHYKPKEIVSDICRDFGIELNYSQAWRGMEMAREQLQGSYKEAYNQLPWFCERVVETNPGSVARFTTKDALSFQRLFISFHASLHGFQNGCRPLLFLDSTSLKSKYQEILLVAAAVDGDDGIFPVAFAIADVEDDDNWHWFLEQLKSVVSTSGSITFVSDREKGLRKSVQEVFENAHHGYCIRHLVENFKKNLKGPFHGDGKGSLAGNFLAAAQALRLDGFRKCTESIKSVSSEAYNWVMESEPEYWSNAQFKGERYNQITLDIVESFDNWIAEVRELPITQKIDAIRCKMMELIHTRRVDSSNWPTKLTPSKEEKLQEEALKAHSLKVLFSSDSTFEVHDDSINVVNIDQRECSCLGWKITGLPCCHAIAVFNCTGRSPYDYCSRYFTTETFQLTYSESINAVPDIGKPVNRESSDKVQVHPPRPCTSHPPSQPKRKRTKAQEVLKRSLHCSRCKGAGHNRATCKAME* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00380 895 Pfam MuDR family transposase 326 390 IPR004332 -
Eupl10g00380 895 Pfam MULE transposase domain 521 614 IPR018289 -
Eupl10g00380 895 SMART 26again6 778 805 IPR006564 GO:0008270
Eupl10g00380 895 PANTHER POLYPROTEIN, PUTATIVE-RELATED 316 861 - -
Eupl10g00380 895 CDD PB1_UP2 9 95 - -
Eupl10g00380 895 ProSiteProfiles Zinc finger SWIM-type profile. 771 803 IPR007527 GO:0008270
Eupl10g00380 895 SMART PB1_new 19 102 IPR000270 GO:0005515
Eupl10g00380 895 MobiDBLite consensus disorder prediction 193 223 - -
Eupl10g00380 895 MobiDBLite consensus disorder prediction 833 867 - -
Eupl10g00380 895 MobiDBLite consensus disorder prediction 164 225 - -
Eupl10g00380 895 Pfam SWIM zinc finger 773 801 IPR007527 GO:0008270
Eupl10g00380 895 Pfam PB1 domain 21 89 IPR000270 GO:0005515
Eupl10g00380 895 SUPERFAMILY CAD & PB1 domains 21 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00380 Eupl-Chr10 19518971 19524265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00380 5 92 MAP Kinase Kinase Kinase AT1G79570 28.889 5.17e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00380 - - tss:122669165 1124.77