Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00322 ATGAAGTTACTTCTTCTTCTTCTTCTACCCATTTGGGGTTTTTGCTTTTCTATGTTTTCAGCTCTCAATGATGCTAGACCAGAGCCTTTTTTTTCCTCCATTTCTGGTCCTGCTTTGTCCCCTGAAAAAGAACCCATTTCTCCAATTTCTGCAACAACAATGGCGGCAGTTTCTCCAGGGGTACAGGAGGAAAGAGTGGAGCAAAGTCACCATTCAGACAAGAAACTGCTTATAGCACTCATCGTTGTGTCCGCTGCCCTCTGTGCAATGGTATCATCTTTATTTTGTTTCTGGATTTGCCAACCGAAGAACTCGCAAAACTCTGATCCAAAGAGTGTACAAAACTCAGATGCCTCCAGAGGACTCGCATTAGGTCCATTTCTGGGTAAATTCAATTCCTTGAGAATGAATGGTAAGAAGGGATCTGTCTCTGTAATCGAGTATCCATTGTTGGAAGCTGCAACGAACAACTTCCGGGATAGTAATATTTTAGGGGAGGGTGGATTTGGATGTGTTTACAAAGCTCGCTTCGACGACAACTTCCTTGCTGCTGTGAAGAGACTAGAGTGTGGAAGGCAGGATGCAGAAAGGGAATTTGAGAATGAGGTGGATTTGTTGAGCAAAATCCGGCATACGAATATGATTTCTCTTTTGGGTTATTGCATTCATGGCGAGACAAGGTTTATAATTTATGAATTGATGCAGAATGGATCTCTAGCAACCCAATTACATGGACCTGCTCATGGATCGGTTTTGACTTGGCATCTCCGCATGAAAATTGCACTTGATACGGCGAGAGGACTAGAATATCTTCATGAGCACTGCAACCCTCCTGTGATTCATAGAGATCTAAAATCATCTAATATTCTTCTGGATTCAAACTTCAATGCCAAGCTTTCAGATTTTGGTCTTGCTGTAATTTCTGGAGCACAGAACAAGAACAACATCAAGCTTTCAGGCACTCTGGGTTATGTAGCTCCCGAATACCTTTTAGATGGTAAACTGACGGAGAAAAGTGATGTCTATGCTTTCGGGGTTGTACTTTTGGAGCTTCTGATGGGAAGAAAGCCTGTAGAAAAGATGACACCATCTCAATGCCAATCTATTGTGACATGGGCCATGCCTCAACTCACTGATAGATCAAAGCTTCCAAACATCGTGGATCCTGTGATCAGAAACACGATGGATCTGAAGCACTTATACCAAGTCGCTGCTGTAGCTGTGCTGTGTGTACAACCAGAACCAAGTTATCGTCCATTGATAACAGATGTCTTGCACTCCCTCATCCCTCTCGTTCCAGTTGAGCTTGGAGGGACCCTAAGAGTTACAGAACCTGCACCTCTCGCCGGTCCCAAGTCCTTGTCTCAATAA 1371 0.4362 MKLLLLLLLPIWGFCFSMFSALNDARPEPFFSSISGPALSPEKEPISPISATTMAAVSPGVQEERVEQSHHSDKKLLIALIVVSAALCAMVSSLFCFWICQPKNSQNSDPKSVQNSDASRGLALGPFLGKFNSLRMNGKKGSVSVIEYPLLEAATNNFRDSNILGEGGFGCVYKARFDDNFLAAVKRLECGRQDAEREFENEVDLLSKIRHTNMISLLGYCIHGETRFIIYELMQNGSLATQLHGPAHGSVLTWHLRMKIALDTARGLEYLHEHCNPPVIHRDLKSSNILLDSNFNAKLSDFGLAVISGAQNKNNIKLSGTLGYVAPEYLLDGKLTEKSDVYAFGVVLLELLMGRKPVEKMTPSQCQSIVTWAMPQLTDRSKLPNIVDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRVTEPAPLAGPKSLSQ* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00322 456 Pfam Protein kinase domain 159 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00322 456 FunFam Protein kinase superfamily protein 125 233 - -
Eupl10g00322 456 ProSiteProfiles Protein kinase domain profile. 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00322 456 Gene3D Transferase(Phosphotransferase) domain 1 234 433 - -
Eupl10g00322 456 CDD STKc_IRAK 164 431 - -
Eupl10g00322 456 SUPERFAMILY Protein kinase-like (PK-like) 139 428 IPR011009 -
Eupl10g00322 456 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Eupl10g00322 456 Gene3D Phosphorylase Kinase; domain 1 130 233 - -
Eupl10g00322 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Eupl10g00322 456 FunFam probable receptor-like protein kinase At1g80640 234 433 - -
Eupl10g00322 456 PANTHER OS01G0750732 PROTEIN 38 430 - -
Eupl10g00322 456 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00322 Eupl-Chr10 18182951 18186922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00322 4 374 Receptor kinase-like Gene Family AT1G80640 51.733 7.87e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Eupl10g00322 Pkinase 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00322 - - nnu:104603374 695.271