Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00316 ATGGCGATAAGCTTGGATGAAATAAAGAACGAGAATGTCGATCTTGAGAGGATCCCTGTGGAGGAAGTATTCGCTCTTTTGAAATGCTCAAAGGAGGGCTTGACAACGGATGATGGAGAGGAGAGGCTTCAGATTTTCGGGGCCAACAAATTGGAGGAGAAGAAGGAGAGTAAGGTTCTCAAGTTCTTGGGATTTATGTGGAATCCTCTGTCGTGGGTCATGGAAATCGCTGCTGTGATGGCCATAGCTTTGGCAAATGGAGGGGGTAAACCTCCCGATTGGCAAGATTTCCTTGGTATCATGGTGTTGCTGGTCATCAACTCAACAATCAGCTTCATAGAAGAAAATAACGCTGGAAATGCAGCAGCTGCTCTAATGGCGGGTCTTGCTCCCAAGGCCAAGGTGCTGAGAAATGGAAGATGGAGCGAACAGGACGCTGCAATCCTGGTACCAGGAGATGTAATTAGCATCAAGTTGGGAGACATCGTACCTGCAGATGCTCGCCTGTTGCAAGGGGACCCACTGAAGATAGATCAGTCGGCTCTCACTGGTGAGTCCTTGCCCGTCACGAAACACCCTGGGGACGGGATCTTCTCTGGGTCCACCTGCAAGCAAGGTGAGATCGAGGCCGTTGTCATCGCCACTGGGGTCCACACTTTCTTCGGCAAGGCCGCTCATCTCGTTGACAGTACAAACCAAGTCGGTCATTTCCAAAAGGTGTTGACGGCTATAGGTAACTTCTGTATATGCTCAATCGCATTGGGGATGATAGTGGAGATAGTCGTGATGTACCCAATCCAGCACCGTAGGTATAGAGACGGGATTGATAACCTGTTGGTGCTTCTCATTGGTGGGATTCCCATTGCCATGCCAACGGTCTTATCGGTAACCATGGCTATTGGGTCCCACCGACTGTCACAGCAAGGTGCCATCACCAAGCGTATGACCGCAATCGAAGAGATGGCTGGGATGGACGTCCTCTGCAGCGACAAAACTGGGACATTGACCCTCAACAAGCTCACCGTCGATCGGACCATGATTGAGGTATTCGTGAAGGACATGGACAAGGACACTGTTATTTTGACAGCTGCCATGGCTTCAAGGATTGAGAACCAAGACGCCATCGACTCTTCAATTGTTGGAATGTTGGGTGACCCTAGCGAGGCGCGAGCAAGGATCAAGGAGATTATAGACCTTTGCAACCTTAAGGGTGAAGCCAAGAACAAAGTCCACTCCATCATTGACAAGTTCGCCGAACGGGGTCTTCGTTCTCTAGGTGTTGCACGACAGACGGTCCCAGAGAAGACCAAGGAGAGTGCGGGAGGGCCATGGCAGTTTGTGGGTCTCTTACCTCTCTTCGACCCTCCTAGACATGATAGCGCAGAGACCATTCGCAGGGCCCTGAACCTCGGCGTCAACGTCAAGATGATTACCGGTGATCAGCTCGCCATTGGCAAGGAGACTGGTCGTCGTCTGGGCATGGGCACCAACATGTACCCCTCCTCCTCCCTCCTTGGGCAATGCAAGGACGAGTCCATCGCTTCCATCCCTATCGATGAGCTCATTGAAAAGGCCGACGGCTTTGCTGGTGTCTTCCCAGAGCACAAGTATGAGATTGTGAAGAAGTTGCAAGAGAGGAAGCACATATGCGGCATGACCGGAGATGGTGTGAACGATGCCCCTGCACTGAAGAAGGCAGACATTGGGATCGCTGTTGCGGATGCAACCGATGCGGCTCGGGGCGCGTCGGACATAGTGTTGACTGAGCCGGGGCTTAGCGTGATCATTAGTGCCGTGTTAACTAGCAGGGCCATTTTCCAGAGAATGAAGAACTACACAATTTACGCAGTGTCCATCACTATTCGAATTGTGTTGGGGTTCATGCTCATTGCCCTTATCTGGAAATTTGATTTCTCACCCTTCATGGTACTGATCATCGCTATCCTCAACGACGGCACAATCATGACCATCTCCAAGGATAGGGTGAAGCCATCACCAATGCCAGACTCATGGAAGCTCAAGGAGATCTTCGCAACTGGCATTGTCTCGGCACCTACCTCGCCGTCATGA 2070 0.5135 MAISLDEIKNENVDLERIPVEEVFALLKCSKEGLTTDDGEERLQIFGANKLEEKKESKVLKFLGFMWNPLSWVMEIAAVMAIALANGGGKPPDWQDFLGIMVLLVINSTISFIEENNAGNAAAALMAGLAPKAKVLRNGRWSEQDAAILVPGDVISIKLGDIVPADARLLQGDPLKIDQSALTGESLPVTKHPGDGIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMIVEIVVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRTMIEVFVKDMDKDTVILTAAMASRIENQDAIDSSIVGMLGDPSEARARIKEIIDLCNLKGEAKNKVHSIIDKFAERGLRSLGVARQTVPEKTKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQCKDESIASIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVSAPTSPS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00316 689 SUPERFAMILY Calcium ATPase, transduction domain A 131 228 IPR008250 -
Eupl10g00316 689 Gene3D - 450 590 IPR023214 -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 448 459 - -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 553 572 - -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 470 480 - -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 178 192 - -
Eupl10g00316 689 PRINTS P-type cation-transporting ATPase superfamily signature 576 588 - -
Eupl10g00316 689 Pfam Cation transporter/ATPase, N-terminus 18 80 IPR004014 -
Eupl10g00316 689 CDD P-type_ATPase_H 33 682 IPR006534 GO:0008553|GO:0016020|GO:0120029
Eupl10g00316 689 NCBIfam HAD-IC family P-type ATPase 528 641 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl10g00316 689 NCBIfam HAD-IC family P-type ATPase 100 501 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl10g00316 689 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 684 IPR023298 -
Eupl10g00316 689 Gene3D - 340 394 IPR023299 GO:0000166
Eupl10g00316 689 Gene3D - 395 449 IPR023299 GO:0000166
Eupl10g00316 689 SMART Cation_ATPase_N_a_2 14 86 IPR004014 -
Eupl10g00316 689 FunFam Plasma membrane ATPase 446 601 - -
Eupl10g00316 689 FunFam Plasma membrane ATPase 131 215 - -
Eupl10g00316 689 Pfam E1-E2 ATPase 130 307 - -
Eupl10g00316 689 Gene3D - 191 332 - -
Eupl10g00316 689 Gene3D - 65 144 - -
Eupl10g00316 689 SUPERFAMILY HAD-like 324 600 IPR036412 -
Eupl10g00316 689 FunFam Membrane H(+)-ATPase1 393 453 - -
Eupl10g00316 689 PANTHER CALCIUM-TRANSPORTING ATPASE 17 396 - -
Eupl10g00316 689 Pfam haloacid dehalogenase-like hydrolase 324 567 - -
Eupl10g00316 689 ProSitePatterns E1-E2 ATPases phosphorylation site. 330 336 IPR018303 -
Eupl10g00316 689 PRINTS H+-transporting ATPase (proton pump) signature 553 569 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl10g00316 689 PRINTS H+-transporting ATPase (proton pump) signature 584 609 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl10g00316 689 PRINTS H+-transporting ATPase (proton pump) signature 525 541 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl10g00316 689 PRINTS H+-transporting ATPase (proton pump) signature 410 428 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00316 Eupl-Chr10 18118773 18124329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00316 3 682 Primary Pumps ATPases AT3G42640 83.754 0.0 1193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00316 K01535 - mof:131158345 1176.77