Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00314 ATGGCTAGGCCACAGCAACGTTATCGAGGCGTTCGTCAGAGGCATTGGGGCTCTTGGGTATCCGAAATTCGCCACCCCTTGTTGAAGACTAGAATTTGGCTGGGGACGTTCGAAACGGCAGAGGACGCAGCTCGTGCTTACGACGAAGCAGCAAGACTGATGTGTGGGCCCAGAGCCAGAACCAACTTCCCTTACAACCCCAATGCGCCTCACTCCTCTTCCTCCACCCTTCTCTCTGCAACTTTGACAGCAAAATTACATCGTTGCCACATGGCATCACTCCAGGTGACCCGACCCGTTTTAAAAGAGCCTCAAAGAACTATGGTTGCAACCAGTAATGGCATTTCTGGGAAAACTGAGGAAATGGGTATGTGGTCAAGTTCGAAGAAAGTGCAAATGGAGAGTACCCATCAATTCAAAGCTCTTGAAGATGATCATATAGAACAGATGATAGAAGAATTGCTTGATTCTGGGCCTATTGAGCTCTTCTCTGGTTCTATATAG 504 0.4841 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNAPHSSSSTLLSATLTAKLHRCHMASLQVTRPVLKEPQRTMVATSNGISGKTEEMGMWSSSKKVQMESTHQFKALEDDHIEQMIEELLDSGPIELFSGSI* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00314 167 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Eupl10g00314 167 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 126 - -
Eupl10g00314 167 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Eupl10g00314 167 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Eupl10g00314 167 FunFam Ethylene-responsive transcription factor 2 6 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00314 Eupl-Chr10 18068427 18069289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00314 1 164 AP2-EREBP Transcription Factor Family AT5G25190 66.477 8.35e-73 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl10g00314 AP2 6.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00314 - - nnu:104589060 258.455