Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00292 ATGACAGTCGAGGAAATACGGGGAAGTACTAGTGAGGATGAACCGAAAAATGACCTGTTTCCGGTGGGTATGCGTGTTCTTGCCGTCGATGATGATCACACTTGCTTGAAGGTGTTGGAGACTCTCCTCCGTCGTTGCCAGTATCATGTTACAACGACTACTCAGGCGATTACAGCACTGAAGATGCTGAGAGAGAACAGAAACAGGTTTGACCTGGTTATCAGCGATGTCCATATGCCTGACATGGATGGTTTTAAGCTTCTTGAGCTTGTGGGGCTTGAAATGGACCTACCTGTCATAATGTTGTCAGGACTTAGTGACACCAAACTTGTGATGAAGGGGATTGCCCACGGTGCTTGTGACTATTTACTAAAACCCGTCCGAATTGAGGAGCTCAAGAACATCTGGCAACATGTAATTAGGAGAAGGAAGTTTGATTCCAAGGACCAAAACAATTTTGACAATCCAGAGAATCCTCAGCAGGGAACAGTTGAAGGTGGACAAGGGCCTGCAATGAATGGACATGTTGATCAGAATGGGAAACTCAACAGGAAACGCAAGGACCAGGACGAAGAGGAGGACGAGGACTGTGAGGACAGTGGGATCGATAATGAGGACCCGTCAGCCCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAACTGCACCGCAAGTTTGTCGCAGCTGTTAATCAATTGGGCATAGACAAGGCTGTACCTAAGAAGATACTAGATCTGATGAATGTAGAAAAGCTTACTAGAGAAAATGTGGCAAGCCATCTTCAGAAATATAGGCTTTATCTGAAAAGGATCAGTTGTGTGGCAAGCCAGCAAGCTAACATGGTTGCTGCGTTTGGGAGCAAAGATTGCTCTTATTTGCATATGAGTTCATTGGAAGGACTTGGAGATTTTCACACCTTGGCAGGATCAGGGCAGCTGCCAAATGCTGCTCTGGCACCCTTCCCTCCAGGTGGGATGCTTGGTAGATTGAACACCCCTGCTGGTTTGGGCCTGCGTGGGCTTGCTTCTTCTGGAATGATCCAACTGGGCCATTCTCAAAACTCTGGAAACTCCGTCAGCGATCTCGGGAAGCTGCAGCAGATCATCTTACCTGGAAATCAAAACGGCAATTTACTTCAAGGCATGCCGACGCCATTGGAACTCGACCAATTGCAACAGAACAAGTACATTGCTCACATTGGAGATTTCTCCACTCCCATTGATGATCTGACGGTTTTTCCAGTTGCCAGTGGTTTCCCAGACACCGGAGTGACCATTGGTAGCTCAAGCAACTCTTTTCTCAATATCCCAAACAGTGCCTCGATGTTACAAGGACCCCCACAACAAACACAGAGTAGGGGAGGACAGGGAAATCAATCTTCTGTTAGAATGGGCTCACTTAACTCGGAGGCATTCGAGAATGGAGTTGGTGTTTCTGCTCATTTGCCCGACCAGAGTAGATGTAATGACAACTGGCAAAGTGCTGTTCAACTAACCGGGTTTCCATTCAACCCCTTGCCATTGAGTGACCCTTTTAATCATGCTAATTTGTCTCCTAATAACTTTAGGGACAATATTTCTTCAATAAACCCACATATCGGGAGCAATCCACTTGATGTTTCCCCCAACAGTATACTACCAGCACCTATGCAGGATTCAAGAAGAGATGCACAAAGCCAAGCAGGCCCAATTCGTGTTAATAATCAGCATAATAATCCAAAGTTCTCGAATTTTGGAAGTATGAGCAATGGTGTTGGCCAGAATATGAACTATGCTCCAAAGCAAAAGTGGGAAGGTCAGAAGCAGGATTACACCCACAACTCAAATTTTATCTTCAGTTCTGTAAACTCTTCGGTGCCTATCCACGGTGTTGTGGGTCCCTTGGGCCAGAATTTGGGCCAAAACAATGCAGTCTGCAATAGAAAGATGGATGTGACTTTGACCTGCCAATCAAATTGTGGTACTCCATATCTCATGCAGCATGACGGGGTTGAAAAGTCAGCTATGGACTCAACAATGAAGTTGAAGGAAGATTACCTCTTGGAGCAGACTAAGTCGCAGGGTGGGTTCATTTCTAATAATTGTGGCTCTTTGGAAGATCTAATGAGTGCGATGATTAAACAGGATCAAGTTTATGTCATGCAGGAGCGAGATGAGCTTACATTAATGGACGGAGATATCGGATGCGATATTTACCCTCTCCGAACATGTATTTGA 2214 0.4575 MTVEEIRGSTSEDEPKNDLFPVGMRVLAVDDDHTCLKVLETLLRRCQYHVTTTTQAITALKMLRENRNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGLSDTKLVMKGIAHGACDYLLKPVRIEELKNIWQHVIRRRKFDSKDQNNFDNPENPQQGTVEGGQGPAMNGHVDQNGKLNRKRKDQDEEEDEDCEDSGIDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVASQQANMVAAFGSKDCSYLHMSSLEGLGDFHTLAGSGQLPNAALAPFPPGGMLGRLNTPAGLGLRGLASSGMIQLGHSQNSGNSVSDLGKLQQIILPGNQNGNLLQGMPTPLELDQLQQNKYIAHIGDFSTPIDDLTVFPVASGFPDTGVTIGSSSNSFLNIPNSASMLQGPPQQTQSRGGQGNQSSVRMGSLNSEAFENGVGVSAHLPDQSRCNDNWQSAVQLTGFPFNPLPLSDPFNHANLSPNNFRDNISSINPHIGSNPLDVSPNSILPAPMQDSRRDAQSQAGPIRVNNQHNNPKFSNFGSMSNGVGQNMNYAPKQKWEGQKQDYTHNSNFIFSSVNSSVPIHGVVGPLGQNLGQNNAVCNRKMDVTLTCQSNCGTPYLMQHDGVEKSAMDSTMKLKEDYLLEQTKSQGGFISNNCGSLEDLMSAMIKQDQVYVMQERDELTLMDGDIGCDIYPLRTCI* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00292 737 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 268 IPR017930 -
Eupl10g00292 737 Gene3D - 208 271 - -
Eupl10g00292 737 Pfam Myb-like DNA-binding domain 214 264 IPR001005 -
Eupl10g00292 737 MobiDBLite consensus disorder prediction 152 167 - -
Eupl10g00292 737 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 258 IPR045279 GO:0009736
Eupl10g00292 737 PIRSF RR_ARR_type-B 1 736 IPR017053 GO:0003677|GO:0003700|GO:0009736
Eupl10g00292 737 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 265 IPR006447 GO:0003677
Eupl10g00292 737 MobiDBLite consensus disorder prediction 436 462 - -
Eupl10g00292 737 FunFam Two-component response regulator 208 271 - -
Eupl10g00292 737 MobiDBLite consensus disorder prediction 147 211 - -
Eupl10g00292 737 SUPERFAMILY Homeodomain-like 210 269 IPR009057 -
Eupl10g00292 737 SMART REC_2 24 136 IPR001789 GO:0000160
Eupl10g00292 737 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Eupl10g00292 737 CDD REC_typeB_ARR-like 26 140 - -
Eupl10g00292 737 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Eupl10g00292 737 SUPERFAMILY CheY-like 23 148 IPR011006 -
Eupl10g00292 737 Gene3D - 23 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00292 Eupl-Chr10 17424667 17439442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00292 18 517 Response Regulator Gene Family AT2G25180 52.918 1.91e-142 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Eupl10g00292 Response_reg 2.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00292 K14491 - nnu:104610687 983.786