Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00283 ATGGCAGACTCTGAGGATGTTGCATCAGCCCCTTCTACTCCTGCAACCCCAGGCACACCAGGTGCTCCTCTCTTTGGTGGGTTCAGGACTGACAGAAGTGGGAATTTTAGAAGATCCCTTCTTAAGAGCTGTAGGTGTTTCAGTGTTGAAACATGGGCTATGGAAGAAGGAAGCTTAGGCACTGTCACCTGCTCATTGTCGCCGCCTCCCGTCTCGCTCGCGAGAAAGGTGGGAGCAGAGTTCATAGGCACCCTCATACTCATATTTGCAGGGACAGCTACAGGCATTGTGAACCAAAAGACACAAGGCTCGGAGACACTTCTCGGCCTCGCCGCCTCCACCGGTCTCGCAGTTATGATAGTTATACTCTCCACAGGTCACATTTCAGGAGCCCATCTCAACCCATCAGTCACCATTGCATTTGCAGCACTTAAGCACTTCCCATGGAAACAGGTACCCATGTACATTGGAGCACAGGTGATGGCATCTCTTTGTGCTGCATTTGCACTAAAGGGGATTTTCCATCCCTTTATGGGAGGTGGAGTAACTGTTCCGTCTGGGGGCTATGGTCAGGCCTTTGCTTTGGAGTTCATCATCTCCTTCAACCTCATGTTCGTTGTTACAGCTGTGGCCACCGACACAAGAGCTGTGGGAGAGCTAGCAGGGATTGCAGTTGGAGCCACTGTCATGCTCAACATACTAATTGCAGGGCCAACCACTGGAGCTTCCATGAACCCAGTGAGAACATTGGGTCCAGCCATAGCTGCAAATAACTACAAGGCCATTTGGGTCTACCTCACGGCCCCTATCTTCGGCGCACTCTGCGGTGCAGGTGTCTATTCTATCGTCAAACTACCAGAAGACGATAACGACGCTCAAGATAAGCCATCCAGAATTCGAAGTTTGAGAAGGTGA 915 0.5104 MADSEDVASAPSTPATPGTPGAPLFGGFRTDRSGNFRRSLLKSCRCFSVETWAMEEGSLGTVTCSLSPPPVSLARKVGAEFIGTLILIFAGTATGIVNQKTQGSETLLGLAASTGLAVMIVILSTGHISGAHLNPSVTIAFAALKHFPWKQVPMYIGAQVMASLCAAFALKGIFHPFMGGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPTTGASMNPVRTLGPAIAANNYKAIWVYLTAPIFGALCGAGVYSIVKLPEDDNDAQDKPSRIRSLRR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00283 304 CDD MIP 75 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 SUPERFAMILY Aquaporin-like 72 288 IPR023271 -
Eupl10g00283 304 FunFam Aquaporin NIP2-1 63 295 - -
Eupl10g00283 304 MobiDBLite consensus disorder prediction 1 27 - -
Eupl10g00283 304 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl10g00283 304 Gene3D Glycerol uptake facilitator protein. 65 296 IPR023271 -
Eupl10g00283 304 PANTHER AQUAPORIN NIP2-1 43 288 IPR034294 -
Eupl10g00283 304 Pfam Major intrinsic protein 72 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00283 Eupl-Chr10 17168886 17171731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00283 3 304 Major Intrinsic Protein MIP AT1G80760 77.597 1.19e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00283 K09874 - nnu:104610700 499.59